RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TSC22D1Q15714 1073 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 GABRA6Q16445 453 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 RFX4Q33E94 735 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 PTPN20Q4JDL3 420 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 LRRC10Q5BKY1 277 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 LIN9Q5TKA1 542 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 SNX20Q7Z614 316 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 UNC93AQ86WB7 457 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 TMEM61Q8N0U2 210 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 VKORC1L1Q8N0U8 176 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 CBR4Q8N4T8 237 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 NKAPP1Q8N9T2 125 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 DRAXINQ8NBI3 349 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR2A1Q8NGT9 310 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR2G3Q8NGZ4 309 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR51E1Q8TCB6 317 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 APH1BQ8WW43 257 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 FAM3DQ96BQ1 224 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 GLT1D1Q96MS3 346 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 SDHCQ99643 169 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 NAPGQ99747 312 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 FOXC2Q99958 501 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 RASL11BQ9BPW5 248 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 TMEM175Q9BSA9 504 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 GABARAPL3Q9BY60 117 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 NAA50Q9GZZ1 169 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 TMEM38AQ9H6F2 299 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 VCX3AQ9NNX9 186 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 ACP6Q9NPH0 428 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 XCL2Q9UBD3 114 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 RCL1Q9Y2P8 373 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 HEBP2Q9Y5Z4 205 aa2.9□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZNF726A6NNF4 738 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 HIDE1A8MVS5 230 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 KMOO15229 486 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 SLC31A2O15432 143 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 ICOSLGO75144 302 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 MPDU1O75352 247 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 TNFSF13O75888 250 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 CTRB1P17538 263 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 PSMC3P17980 439 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 CNR1P21554 472 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 PRKACBP22694 351 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 RPS21P63220 83 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 SLC25A11Q02978 314 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZNF763Q0D2J5 394 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 SMARCB1Q12824 385 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 ART3Q13508 389 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 TFDP2Q14188 446 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 RCAN2Q14206 197 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 FZD2Q14332 565 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 GPR176Q14439 515 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 KIAA0087Q14695 138 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 TPRG1LQ5T0D9 272 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 ANKRD22Q5VYY1 191 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 CTRB2Q6GPI1 263 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 C6orf89Q6UWU4 347 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 H2AFVQ71UI9 128 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 FAM122BQ7Z309 247 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 ITFG1Q8TB96 612 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 TMEM230Q96A57 120 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 RPUSD4Q96CM3 377 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 DYNLL2Q96FJ2 89 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 C16orf74Q96GX8 76 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 RNF170Q96K19 258 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 CALN1Q9BXU9 219 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 DEFB129Q9H1M3 183 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 ARMC7Q9H6L4 198 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 TMEM9BQ9NQ34 198 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 PDS5BQ9NTI5 1447 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 PCYOX1Q9UHG3 505 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 MOKQ9UQ07 419 aa2.89□□□□□ -1.95
TRAPPC13-209ENST00000508304 TRAV39A0A0B4J263 110 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 IGKV1D-13A0A0B4J2D9 117 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 A0A1B0GVI7 797 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 GSTTP1A0A1W2PQM5 241 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 SYCE1LA8MT33 242 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 FAM166BA8MTA8 275 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 PDZK1P1A8MUH7 402 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZNF99A8MXY4 864 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZBTB5O15062 677 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 RAD51CO43502 376 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 SRP72O76094 671 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 SUPT7LO94864 414 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 TIMP1P01033 207 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CHTF8P0CG12 524 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CT45A6P0DMU7 189 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CT45A5P0DMU8 189 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CT45A7P0DMV0 189 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 IGKV1-13P0DP09 117 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CSNK2A2P19784 350 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ARR3P36575 388 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 PSMC5P62195 406 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 IRX3P78415 501 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 GGTLC2Q14390 218 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CT45A1Q5HYN5 189 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 THEM4Q5T1C6 240 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 UBE2UQ5VVX9 321 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 SPECC1LQ69YQ0 1117 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms