RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 AQP11Q8NBQ7 271 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 OR9Q2Q8NGE9 314 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 UBASH3BQ8TF42 649 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 CLPTM1LQ96KA5 538 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 CHID1Q9BWS9 393 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 RERGLQ9H628 205 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 EMC7Q9NPA0 242 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 TBCCD1Q9NVR7 557 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 NKIRAS2Q9NYR9 191 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 POLR1DQ9Y2S0 133 aa17.06■□□□□ 0.32
SFXN1-209ENST00000508290 ARFGEF3Q5TH69 2177 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 IGLV1-36A0A0B4J1U3 117 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 DOK2O60496 412 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 LY6HO94772 140 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 CST1P01037 141 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 HIST1H1CP16403 213 aaKnown RBP17.05■□□□□ 0.32
SFXN1-209ENST00000508290 ZMAT1Q5H9K5 638 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 MBNL2Q5VZF2 373 aaKnown RBP17.05■□□□□ 0.32
SFXN1-209ENST00000508290 TMEM154Q6P9G4 183 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 UGT2A3Q6UWM9 527 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 ZBTB46Q86UZ6 589 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 ADGRG5Q8IZF4 528 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 GJC3Q8NFK1 279 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 SLC7A6OSQ96CW6 309 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-209ENST00000508290 POM121Q96HA1 1249 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 C4orf45Q96LM5 186 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 DCLRE1CQ96SD1 692 aaKnown RBP17.05■□□□□ 0.32
SFXN1-209ENST00000508290 NMNAT3Q96T66 252 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 CYSLTR2Q9NS75 346 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 PLEK2Q9NYT0 353 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 ASH2LQ9UBL3 628 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 KCNG2Q9UJ96 466 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 B9D1Q9UPM9 204 aa17.05■□□□□ 0.32
SFXN1-209ENST00000508290 NIPBLQ6KC79 2804 aaeCLIP17.04■□□□□ 0.32
SFXN1-209ENST00000508290 HIVEP2P31629 2446 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 BHLHE40O14503 412 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 GASTP01350 101 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 IGFBP1P08833 259 aaPredicted RBP17.04■□□□□ 0.32
SFXN1-209ENST00000508290 HTR5AP47898 357 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 RGS6P49758 472 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 BNIP1Q12981 228 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 TMEM249Q2WGJ8 235 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 CD300LDQ6UXZ3 194 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 Q71RC1 249 aaPredicted RBP17.04■□□□□ 0.32
SFXN1-209ENST00000508290 VASH1Q7L8A9 365 aaPredicted RBP17.04■□□□□ 0.32
SFXN1-209ENST00000508290 ZNF101Q8IZC7 436 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 OR4K13Q8NH42 304 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 HDHD2Q9H0R4 259 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 MMADHCQ9H3L0 296 aaPredicted RBP17.04■□□□□ 0.32
SFXN1-209ENST00000508290 HINT3Q9NQE9 182 aaKnown RBP17.04■□□□□ 0.32
SFXN1-209ENST00000508290 TAAR3PQ9P1P4 343 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 U3KQV3 271 aa17.04■□□□□ 0.32
SFXN1-209ENST00000508290 PLSCR5A0PG75 271 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 C17orf100A8MU93 164 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 GNGT2O14610 69 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 ABHD16AO95870 558 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 SCG5P05408 212 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 GAAP10253 952 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 HOXB4P17483 251 aaPredicted RBP17.03■□□□□ 0.32
SFXN1-209ENST00000508290 WNT5AP41221 380 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 ALDH3B1P43353 468 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 PPP1CBP62140 327 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 KRTAP1-1Q07627 177 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 CARTPTQ16568 116 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 LRP11Q86VZ4 500 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR6V1Q8N148 313 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 LNX2Q8N448 690 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 MAPK1IP1LQ8NDC0 245 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 ICA1LQ8NDH6 482 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 SLC26A10Q8NG04 563 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR2T33Q8NG76 320 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR10G2Q8NGC3 310 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR52E2Q8NGJ4 325 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR2T4Q8NH00 348 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 ABHD4Q8TB40 342 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 RDH5Q92781 318 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 MARS2Q96GW9 593 aaKnown RBP17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR51B6Q9H340 312 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 TPK1Q9H3S4 243 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 EGLN3Q9H6Z9 239 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 RPRD1BQ9NQG5 326 aaKnown RBP17.03■□□□□ 0.32
SFXN1-209ENST00000508290 TBC1D23Q9NUY8 699 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 FZR1Q9UM11 496 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 POMPQ9Y244 141 aa17.03■□□□□ 0.32
SFXN1-209ENST00000508290 OR6C6A6NF89 314 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 ACHEP22303 614 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 CENPAP49450 140 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 GZMKP49863 264 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 HIST1H3AP68431 136 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 TEKQ02763 1124 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.02■□□□□ 0.32
SFXN1-209ENST00000508290 ECH1Q13011 328 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 CLEC12AQ5QGZ9 265 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 HIST2H3PS2Q5TEC6 136 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 HIST2H3AQ71DI3 136 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 SPATA24Q86W54 205 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 ZCCHC24Q8N2G6 241 aaKnown RBP17.02■□□□□ 0.32
SFXN1-209ENST00000508290 OR1F12Q8NHA8 337 aa17.02■□□□□ 0.32
SFXN1-209ENST00000508290 KLF14Q8TD94 323 aaPredicted RBP17.02■□□□□ 0.32
SFXN1-209ENST00000508290 GIPC3Q8TF64 312 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms