RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 IGHV5-10-1A0A0J9YXX1 117 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 SERTM2A0A1B0GWG4 89 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 WRBO00258 174 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 FGFR1OPO95684 399 aaKnown RBP2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 IGFBP3P17936 291 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 STOMP27105 288 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 HMOX2P30519 316 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 RAB9AP51151 201 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 CRISP1P54107 249 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 SP4Q02446 784 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 GBE1Q04446 702 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 IL18Q14116 193 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 C16orf72Q14CZ0 275 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 QPRTQ15274 297 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 ZNF726P1Q15940 193 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 FAM83EQ2M2I3 478 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 XKR4Q5GH76 650 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 UBE2UQ5VVX9 321 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 METTL21CQ5VZV1 264 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 TWF2Q6IBS0 349 aaKnown RBP2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 TMEM53Q6P2H8 277 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 PLET1Q6UQ28 207 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 OR10G2Q8NGC3 310 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 OR52K2Q8NGK3 314 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 NUBPLQ8TB37 319 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 NTAN1Q96AB6 310 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 GALNT14Q96FL9 552 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 PRRC1Q96M27 445 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 XPO6Q96QU8 1125 aaKnown RBP2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 LZTS2Q9BRK4 669 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 SYNDIG1Q9H7V2 258 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 RETNQ9HD89 108 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 TRMT112Q9UI30 125 aaKnown RBP2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 ZNF222Q9UK12 451 aa2.49□□□□□ -2.01
HMGB1P28-201ENST00000507778 RLFQ13129 1914 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 IGLV1-50A0A075B6I6 118 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 H7C0C1 242 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CASQ2O14958 399 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 SCAMP2O15127 329 aaKnown RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CACNG3O60359 315 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 DNAJB6O75190 326 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 ZNF324O75467 553 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CCNB2O95067 398 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CTDNEP1O95476 244 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 ARG1P05089 322 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CT45A6P0DMU7 189 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CT45A5P0DMU8 189 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CT45A7P0DMV0 189 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 IGHV1-8P0DP01 117 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 GGT1P19440 569 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 ATP5OP48047 213 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 PON2Q15165 354 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CT45A1Q5HYN5 189 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 FAM71E1Q6IPT2 247 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 FBXW12Q6X9E4 464 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 TTC29Q8NA56 475 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CT45A3Q8NHU0 189 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 TMEM230Q96A57 120 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 MRGPRFQ96AM1 343 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 PDXPQ96GD0 296 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 MTG1Q9BT17 334 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 ZYG11BQ9C0D3 744 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 ACTR3CQ9C0K3 210 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 SAV1Q9H4B6 383 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 AUNIPQ9H7T9 357 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 UBE2ZQ9H832 354 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 HMG20AQ9NP66 347 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 CCNB1IP1Q9NPC3 277 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 INSRP06213 1382 aa2.48□□□□□ -2.01
HMGB1P28-201ENST00000507778 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 IGLV1-36A0A0B4J1U3 117 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 KBTBD11-OT1A0A1B0GTJ5 212 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 A0A1B0GW55 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 RSPH10B2B2RC85 870 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 B4GALT5O43286 388 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 RDH16O75452 317 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 RP2O75695 350 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 PRB2P02812 416 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 RSPH10BP0C881 870 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 UBTFL6P0CB48 400 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 DUX4L2P0CJ85 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 DUX4L3P0CJ86 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 DUX4L5P0CJ88 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 DUX4L6P0CJ89 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 DUX4L7P0CJ90 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 ANXA8P13928 327 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 PSMC3P17980 439 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 TCN2P20062 427 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 RAB3AP20336 220 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 UBE2NP61088 152 aaKnown RBP2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 CDH17Q12864 832 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 IRF4Q15306 451 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 ORMDL2Q53FV1 153 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 ANXA8L1Q5VT79 327 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 GPR107Q5VW38 600 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 NANOGP8Q6NSW7 305 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 CEMP1Q6PRD7 247 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 SPESP1Q6UW49 350 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 NPSR1Q6W5P4 371 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms