RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TBPL2Q6SJ96 375 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ARL9Q6T311 187 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ZNF730Q6ZMV8 503 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ARPINQ7Z6K5 226 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 SYT9Q86SS6 491 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 BPIFB2Q8N4F0 458 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 NPEPL1Q8NDH3 523 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 NANPQ8TBE9 248 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ST7LQ8TDW4 575 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ACOT11Q8WXI4 607 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 GCDHQ92947 438 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 Q96M85 177 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 DCLRE1CQ96SD1 692 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 SUCNR1Q9BXA5 334 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 C7orf69Q9H7B7 122 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ARMCX1Q9P291 453 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 GRHPRQ9UBQ7 328 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 OPN4Q9UHM6 478 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ADAM18Q9Y3Q7 739 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 NPTNQ9Y639 398 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 ANK2Q01484 3957 aa9.76□□□□□ -0.85
HMGCS1-204ENST00000507293 NBEAL1Q6ZS30 2694 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 A0A087WUU8 490 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 CXCR6O00574 342 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 CDC42EP2O14613 210 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 FOXH1O75593 365 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 PRSS23O95084 383 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 FSHBP01225 129 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 IGHV2-70P01814 119 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 CD14P08571 375 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 SBK2P0C263 348 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 COX5BP10606 129 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 ZNF26P17031 533 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 LIMS1P48059 325 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 COMPP49747 757 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 LIPEQ05469 1076 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 CDK5R2Q13319 367 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 OTPQ5XKR4 325 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 Q6ZR03 302 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 MBOAT2Q6ZWT7 520 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 CBLL1Q75N03 491 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 VASH1Q7L8A9 365 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 ZER1Q7Z7L7 766 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 SLC15A3Q8IY34 581 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 C3orf56Q8N813 242 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 OR2Z1Q8NG97 314 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 C22orf15Q8WYQ4 148 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 HSH2DQ96JZ2 352 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 ZNF570Q96NI8 536 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 WACQ9BTA9 647 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 TMEM106BQ9NUM4 274 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 TBCCD1Q9NVR7 557 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 PURGQ9UJV8 347 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 AP3M1Q9Y2T2 418 aa9.75□□□□□ -0.85
HMGCS1-204ENST00000507293 TEX13CA0A0J9YWL9 993 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 NME4O00746 187 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 XKRYO14609 159 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 GSTA4O15217 222 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 SLC22A2O15244 555 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 SGCEO43556 437 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 SERPINA1P01009 418 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 CTLA4P16410 223 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 TNFSF4P23510 183 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 ERFP50548 548 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 KRR1Q13601 381 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 ZBED5Q49AG3 693 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 TMPRSS11FQ6ZWK6 438 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 FKBP9P1Q75LS8 142 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 FAM122BQ7Z309 247 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 ZDHHC22Q8N966 263 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 FAM156AQ8NDB6 213 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 ITLN1Q8WWA0 313 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 SLC7A6Q92536 515 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 RASD2Q96D21 266 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 CMBLQ96DG6 245 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 NDEL1Q9GZM8 345 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 ESM1Q9NQ30 184 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 PLEK2Q9NYT0 353 aa9.74□□□□□ -0.85
HMGCS1-204ENST00000507293 PRSS37A4D1T9 235 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 TNFRSF1AP19438 455 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 KITLGP21583 273 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 GSK3BP49841 420 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 SLC7A2P52569 658 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 SEC61A1P61619 476 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 BTG1P62324 171 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 AQP6Q13520 282 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 RRM2BQ7LG56 351 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 CYP4Z1Q86W10 505 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 TREML1Q86YW5 311 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 SPICQ8N5J4 248 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 ZNF283Q8N7M2 679 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 DEFB108BQ8NET1 73 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 RP9Q8TA86 221 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 ZMYND19Q96E35 227 aaPredicted RBP9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 FAM46AQ96IP4 442 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 SYT4Q9H2B2 425 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 ANKRD19PQ9H560 264 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms