RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OR4C3Q8NH37 302 aa15.97■□□□□ 0.15
NUP54-205ENST00000507257 FAM3CQ92520 227 aa15.97■□□□□ 0.15
NUP54-205ENST00000507257 SMIM8Q96KF7 97 aa15.97■□□□□ 0.15
NUP54-205ENST00000507257 ZNF251Q9BRH9 671 aa15.97■□□□□ 0.15
NUP54-205ENST00000507257 TREM1Q9NP99 234 aa15.97■□□□□ 0.15
NUP54-205ENST00000507257 FARSAQ9Y285 508 aaKnown RBP15.97■□□□□ 0.15
NUP54-205ENST00000507257 A0A0B4J2A0 478 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 A0A1W2PQU0 124 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 BLACEA4D250 179 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 METTL21EPA6NDL7 271 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 COLCA2A8K830 154 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 LINC01387J3KSC0 135 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 SCGNO76038 276 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 STK17BO94768 372 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 CAV2P51636 162 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 SRSF3P84103 164 aaKnown RBP15.96■□□□□ 0.15
NUP54-205ENST00000507257 TCEA2Q15560 299 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 ODF4Q2M2E3 257 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 KCTD18Q6PI47 426 aaPredicted RBP15.96■□□□□ 0.15
NUP54-205ENST00000507257 CORO6Q6QEF8 472 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 CACUL1Q86Y37 369 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 SHISA5Q8N114 240 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 DTWD2Q8NBA8 298 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 RNF126Q9BV68 326 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 SYT4Q9H2B2 425 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 SHPKQ9UHJ6 478 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 CSAG2Q9Y5P2 127 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 POMT1Q9Y6A1 747 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 FANCMQ8IYD8 2048 aa15.96■□□□□ 0.15
NUP54-205ENST00000507257 A6NCN8 305 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 PNPP00491 289 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 SPTBP11277 2137 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 GSK3AP49840 483 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 POLR2GP62487 172 aaKnown RBP eCLIP15.96■□□□□ 0.14
NUP54-205ENST00000507257 SKP1P63208 163 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 PEA15Q15121 130 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 NKPD1Q17RQ9 610 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 RNF212Q495C1 297 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 LRRC69Q6ZNQ3 347 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 CSNK1A1LQ8N752 337 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 C15orf54Q8N8G6 183 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 KDF1Q8NAX2 398 aaPredicted RBP15.96■□□□□ 0.14
NUP54-205ENST00000507257 ADAMTS17Q8TE56 1095 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 NUDCD2Q8WVJ2 157 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 SLC39A7Q92504 469 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 DCUN1D4Q92564 292 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 SPACA7Q96KW9 195 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 ZDHHC4Q9NPG8 344 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 TAS2R4Q9NYW5 299 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 RAB22AQ9UL26 194 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 DTX4Q9Y2E6 619 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 TMED7Q9Y3B3 224 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 RHBDD3Q9Y3P4 386 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 WIF1Q9Y5W5 379 aa15.96■□□□□ 0.14
NUP54-205ENST00000507257 TBC1D3DA0A087WVF3 549 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 TBC1D3LB9A6J9 549 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 H7C1C5 153 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 PLRG1O43660 514 aaKnown RBP15.95■□□□□ 0.14
NUP54-205ENST00000507257 ISG15P05161 165 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 TBC1D3HP0C7X1 549 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 MAOAP21397 527 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 AVPR2P30518 371 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 GPR3P46089 330 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 LCN6P62502 163 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 EIF5AP63241 154 aaKnown RBP15.95■□□□□ 0.14
NUP54-205ENST00000507257 SKP2Q13309 424 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 CDNFQ49AH0 187 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 TBC1D3CQ6IPX1 549 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 TBC1D3Q8IZP1 549 aaPredicted RBP15.95■□□□□ 0.14
NUP54-205ENST00000507257 AQP10Q96PS8 301 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 SMCO4Q9NRQ5 59 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 SLC22A13Q9Y226 551 aa15.95■□□□□ 0.14
NUP54-205ENST00000507257 FAM221BA6H8Z2 402 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 TMEM235A6NFC5 223 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 RAB27BO00194 218 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 UBE2CO00762 179 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 ERCC1P07992 297 aaPredicted RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 PTGFRP43088 359 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 PGDP52209 483 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 RIDAP52758 137 aaKnown RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 SMAD2Q15796 467 aaKnown RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 GFOD2Q3B7J2 385 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 MOGAT2Q3SYC2 334 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 C1orf53Q5VUE5 145 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 FJX1Q86VR8 437 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 C8orf44Q96CB5 159 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 SLC25A44Q96H78 314 aaPredicted RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 CMKLR1Q99788 373 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 TCEAL7Q9BRU2 100 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 SELENOIQ9C0D9 397 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 SEC61A2Q9H9S3 476 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 ASH2LQ9UBL3 628 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 GDF2Q9UK05 429 aaPredicted RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 HHLA2Q9UM44 414 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 B9D1Q9UPM9 204 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 C5orf52A6NGY3 159 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 SRSF10O75494 262 aaKnown RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 HABP2Q14520 560 aaPredicted RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 FAM109BQ6ICB4 259 aaPredicted RBP15.94■□□□□ 0.14
NUP54-205ENST00000507257 EIF5AL1Q6IS14 154 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms