RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 OR5K1Q8NHB7 308 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 UTP4Q969X6 686 aaKnown RBP14.38□□□□□ -0.11
SNCA-209ENST00000506244 HDHD2Q9H0R4 259 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 ELOVL3Q9HB03 270 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 CMC2Q9NRP2 79 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 GPR160Q9UJ42 338 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 M0R233 179 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 ICMTO60725 284 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 SCG5P05408 212 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 PAICSP22234 425 aaKnown RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 BLVRAP53004 296 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 UCP2P55851 309 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 DSCR9P59020 149 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 CRMP1Q14194 572 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 CLEC2AQ6UVW9 174 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 VASH1Q7L8A9 365 aaPredicted RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 ZDHHC13Q8IUH4 622 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 HS3ST5Q8IZT8 346 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 CYB561A3Q8NBI2 242 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 GJC3Q8NFK1 279 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 OR4Q3Q8NH05 313 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 IPCEF1Q8WWN9 437 aaPredicted RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 RAB3IPQ96QF0 476 aaPredicted RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 VRK1Q99986 396 aaPredicted RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 CDADC1Q9BWV3 514 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 MRPL37Q9BZE1 423 aaKnown RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 RAB1BQ9H0U4 201 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 FN3KQ9H479 309 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 MYOZ1Q9NP98 299 aaPredicted RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 PAPOLBQ9NRJ5 636 aaKnown RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 REV1Q9UBZ9 1251 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 ENOPH1Q9UHY7 261 aa14.37□□□□□ -0.11
SNCA-209ENST00000506244 GDF2Q9UK05 429 aaPredicted RBP14.37□□□□□ -0.11
SNCA-209ENST00000506244 LOC100509620A0A075B734 347 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 A0A1W2PPW3 197 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 H3BSA7 217 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 SYNGR3O43761 229 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 MPZL1O95297 269 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 IGFBP1P08833 259 aaPredicted RBP14.36□□□□□ -0.11
SNCA-209ENST00000506244 ZNF23P17027 643 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 POU1F1P28069 291 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 SLC25A1P53007 311 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 KLF3P57682 345 aaPredicted RBP14.36□□□□□ -0.11
SNCA-209ENST00000506244 ACTR3P61158 418 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 TEKQ02763 1124 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 ZFP1Q6P2D0 407 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 FAHD1Q6P587 224 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.36□□□□□ -0.11
SNCA-209ENST00000506244 PARP8Q8N3A8 854 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 ICA1LQ8NDH6 482 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 OR1J1Q8NGS3 322 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 OR2AJ1Q8NGZ0 328 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 SYT3Q9BQG1 590 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 RBM4Q9BWF3 364 aaKnown RBP14.36□□□□□ -0.11
SNCA-209ENST00000506244 PRRG3Q9BZD7 231 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 OR51B6Q9H340 312 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 HIVEP1P15822 2718 aa14.36□□□□□ -0.11
SNCA-209ENST00000506244 ARFGEF3Q5TH69 2177 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 OR6C6A6NF89 314 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 FAM171A2A8MVW0 826 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 G3V2T6 193 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 J3QW42 95 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 SSX4O60224 188 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 NDUFS7O75251 213 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 ABHD16AO95870 558 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 HMGN1P05114 100 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 ZNF250P15622 560 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 ZNF823P16415 610 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 PRKACGP22612 351 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 TUBG1P23258 451 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 GCH1P30793 250 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 MOGQ16653 247 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 MEP1BQ16820 701 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 IQCF1Q8N6M8 205 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 OR9Q1Q8NGQ5 310 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 ABHD4Q8TB40 342 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 SYNPRQ8TBG9 265 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 SNX33Q8WV41 574 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 C18orf12Q96KH6 178 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 C4orf45Q96LM5 186 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 COG8Q96MW5 612 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 SORCS2Q96PQ0 1159 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 DCLRE1CQ96SD1 692 aaKnown RBP14.35□□□□□ -0.11
SNCA-209ENST00000506244 DOK1Q99704 481 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 COQ7Q99807 217 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 GABARAPL1Q9H0R8 117 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 MS4A5Q9H3V2 200 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 DLL4Q9NR61 685 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 TUBG2Q9NRH3 451 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 SLCO1C1Q9NYB5 712 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 DUSP13Q9UII6 198 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
SNCA-209ENST00000506244 FLNAP21333 2647 aaKnown RBP14.35□□□□□ -0.11
SNCA-209ENST00000506244 VPS13CQ709C8 3753 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 GPANK1O95872 356 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 F12P00748 615 aaPredicted RBP14.34□□□□□ -0.11
SNCA-209ENST00000506244 TFP02787 698 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms