RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PRKAR1BP31321 381 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 KIR2DS4P43632 304 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 NPY4RP50391 375 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 BIDP55957 195 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 SEC61A1P61619 476 aaKnown RBP4.99□□□□□ -1.61
GYPB-204ENST00000504951 CDK6Q00534 326 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 PLP2Q04941 152 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 PUDPQ08623 228 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 FADDQ13158 208 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 ZMYND11Q15326 602 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 OR1Q1Q15612 314 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 NPTX1Q15818 432 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 HIST3H3Q16695 136 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 SLC36A2Q495M3 483 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 SPRNQ5BIV9 151 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 PAGE3Q5JUK9 113 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 HHATQ5VTY9 493 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 WDR93Q6P2C0 686 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 ULK3Q6PHR2 472 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 DHRS4L2Q6PKH6 230 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 MSANTD1Q6ZTZ1 278 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 ZNF771Q7L3S4 317 aaPredicted RBP4.99□□□□□ -1.61
GYPB-204ENST00000504951 MIER2Q8N344 545 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 SPERTQ8NA61 448 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 OR4D11Q8NGI4 311 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 OR6N1Q8NGY5 312 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 OR6X1Q8NH79 312 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 BBS10Q8TAM1 723 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 KLF14Q8TD94 323 aaPredicted RBP4.99□□□□□ -1.61
GYPB-204ENST00000504951 DNAJA4Q8WW22 397 aaPredicted RBP4.99□□□□□ -1.61
GYPB-204ENST00000504951 SH3GL3Q99963 347 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 PARD6BQ9BYG5 372 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 ULBP2Q9BZM5 246 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 TRIM15Q9C019 465 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 ARMC7Q9H6L4 198 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 RMND5AQ9H871 391 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 MARCH7Q9H992 704 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 MAN2C1Q9NTJ4 1040 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 ACOXLQ9NUZ1 547 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 TMEM38BQ9NVV0 291 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 THAP1Q9NVV9 213 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 MRPL39Q9NYK5 338 aaKnown RBP4.99□□□□□ -1.61
GYPB-204ENST00000504951 TAS2R5Q9NYW4 299 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 VAPAQ9P0L0 249 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 RPS6KB2Q9UBS0 482 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 USH1CQ9Y6N9 552 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 LYSTQ99698 3801 aa4.99□□□□□ -1.61
GYPB-204ENST00000504951 CENPVL3A0A0U1RRI6 287 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 IQCMA0A1B0GVH7 501 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 TMEM247A6NEH6 219 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 ZSCAN5BA6NJL1 495 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 C5orf58C9J3I9 102 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 M0R3H8 397 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 UBDO15205 165 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 SPRY3O43610 288 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 EIF4EBP3O60516 100 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 TGDSO95455 350 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 PRB2P02812 416 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 RPLP1P05386 114 aaKnown RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 NHLRC4P0CG21 123 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 ADORA3P0DMS8 318 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 KITLGP21583 273 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 TNFSF4P23510 183 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 CSNK1A1P48729 337 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 RGS8P57771 180 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 TNFAIP6P98066 277 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 GLO1Q04760 184 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 MELKQ14680 651 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 DUSP7Q16829 419 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 TTMPQ5BVD1 217 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 MTX3Q5HYI7 312 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 GCNT6Q5T4J0 391 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 CD276Q5ZPR3 534 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 FAM91A1Q658Y4 838 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 REEP3Q6NUK4 255 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 METAP1DQ6UB28 335 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 EPGNQ6UW88 154 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 BRD3OSQ6XYD6 125 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 ZNF841Q6ZN19 808 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 Q6ZTK2 550 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 KLBQ86Z14 1044 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 RBM45Q8IUH3 476 aaKnown RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 KIRREL3Q8IZU9 778 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 C10orf53Q8N6V4 93 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 SMYD1Q8NB12 490 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 GPR32P1Q8NGA4 272 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 OR4S1Q8NGB4 309 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 OR1J1Q8NGS3 322 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 GATAD2BQ8WXI9 593 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 POM121L2Q96KW2 1035 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 SEPHS2Q99611 448 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 B9D2Q9BPU9 175 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 EBF4Q9BQW3 602 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 NUDT16L1Q9BRJ7 211 aaKnown RBP4.98□□□□□ -1.61
GYPB-204ENST00000504951 ASPNQ9BXN1 380 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
GYPB-204ENST00000504951 DCAF16Q9NXF7 216 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms