RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 GALNT4Q8N4A0 578 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 TCEANCQ8N8B7 351 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 OR10H5Q8NGA6 315 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 OR51L1Q8NGJ5 315 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 TMEM163Q8TC26 289 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 OTULINQ96BN8 352 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 PITX2Q99697 317 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 OR2H1Q9GZK4 316 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 WNT5BQ9H1J7 359 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 OR51V1Q9H2C8 321 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 PLEKHF2Q9H8W4 249 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 MARCH7Q9H992 704 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 MRPL22Q9NWU5 206 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 SMPD3Q9NY59 655 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 NDRG4Q9ULP0 352 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 LHFPL6Q9Y693 200 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 IGHV2OR16-5A0A0B4J2B6 119 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 IQCMA0A1B0GVH7 501 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 SHISA9B4DS77 424 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC16A6O15403 523 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 TLX2O43763 284 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 COX5BP10606 129 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF35P13682 527 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF823P16415 610 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 CDC42P60953 191 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 SPOCK1Q08629 439 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 PCK2Q16822 640 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 TEX30Q5JUR7 227 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 CPEB3Q8NE35 698 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 BBS1Q8NFJ9 593 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 GJC3Q8NFK1 279 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 KBTBD8Q8NFY9 601 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 OR4F15Q8NGB8 312 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 OR8J1Q8NGP2 316 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 OR1J2Q8NGS2 313 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 OR6K6Q8NGW6 343 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 LILRB1Q8NHL6 650 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 TRUB1Q8WWH5 349 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 KCNS3Q9BQ31 491 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 CDADC1Q9BWV3 514 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 FAM118AQ9NWS6 357 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 ASH2LQ9UBL3 628 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 CYB5R1Q9UHQ9 305 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 POLR1DQ9Y2S0 133 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 COMMD3-BMI1R4GMX3 469 aa10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 SETXQ7Z333 2677 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-208ENST00000504489 LOC100130705A0A1B0GUX0 176 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 TVP23AA6NH52 213 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 ATP6V1G2-DDX39BF2Z307 99 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 M0R129 80 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 SGCEO43556 437 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 TMCC2O75069 709 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 APEX1P27695 318 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 GSTT1P30711 240 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 CALCRP30988 508 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 ENTPD1P49961 510 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 KRTAP10-9P60411 292 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 ADAM8P78325 824 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 APOFQ13790 326 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF672Q499Z4 452 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC25A30Q5SVS4 291 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 AADACL4Q5VUY2 407 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 OTPQ5XKR4 325 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC18B1Q6NT16 456 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC22A25Q6T423 547 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 LYPD4Q6UWN0 246 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 VASH1Q7L8A9 365 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC30A7Q8NEW0 376 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 OR2AJ1Q8NGZ0 328 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 FAM81AQ8TBF8 368 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 AKAP1Q92667 903 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 POM121L2Q96KW2 1035 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 IL4I1Q96RQ9 567 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 TEAD3Q99594 435 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 WDR76Q9H967 626 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 IMPAD1Q9NX62 359 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 PLEK2Q9NYT0 353 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 H2AFY2Q9P0M6 372 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 RRP15Q9Y3B9 282 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 GMPPBQ9Y5P6 360 aa10.31□□□□□ -0.76
PDLIM5-208ENST00000504489 USF3Q68DE3 2245 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 CCDC182A6NF36 153 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 OR6C6A6NF89 314 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF593O00488 134 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 HS3ST1O14792 307 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 RER1O15258 196 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ATP6V1G2O95670 118 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 STOMP27105 288 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 APLNRP35414 380 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 CDH11P55287 796 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 SNRPGP62308 76 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 HGFACQ04756 655 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 KEAP1Q14145 624 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 RAB35Q15286 201 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 TBC1D28Q2M2D7 210 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms