RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 HOXC4P09017 264 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 BCKDHAP12694 445 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 HLA-DOBP13765 273 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 PAX9P55771 341 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 DHRS4L2Q6PKH6 230 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TMEM199Q8N511 208 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CPNE2Q96FN4 548 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 NSMCE3Q96MG7 304 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 ACTR6Q9GZN1 396 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 NHEJ1Q9H9Q4 299 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TIGARQ9NQ88 270 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 SDR39U1Q9NRG7 319 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 ISPDA4D126 451 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 CXCL13O43927 109 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 LSM8O95777 96 aaKnown RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 HIST1H1EP10412 219 aaKnown RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ESDP10768 282 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 GNLYP22749 145 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 IGFBP5P24593 272 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 GALR1P47211 349 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 TGFBR3Q03167 851 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 PPP1R1AQ13522 171 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 GPRC6AQ5T6X5 926 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 FHL5Q5TD97 284 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 CMC1Q7Z7K0 106 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 SLC34A3Q8N130 599 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 MRPS31Q92665 395 aaKnown RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 OR10C1Q96KK4 312 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 CAPNS2Q96L46 248 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF670Q9BS34 389 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ABCG5Q9H222 651 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 RNF167Q9H6Y7 350 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ACOT13Q9NPJ3 140 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 OCIAD1Q9NX40 245 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF391Q9UJN7 358 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 WDR17Q8IZU2 1322 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 FAM166BA8MTA8 275 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 B8ZZF3 427 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 PFDN6O15212 129 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 SLC31A1O15431 190 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 PRKYO43930 277 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 GCGP01275 180 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 HBE1P02100 147 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 GSTA1P08263 222 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 FGF2P09038 288 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 CCDC166P0CW27 439 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 PRKXP51817 358 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 LAGE3Q14657 143 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 DHRSXQ8N5I4 330 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 CLDN23Q96B33 292 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 OR2V2Q96R30 315 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 PHB2Q99623 299 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ABCC13Q9NSE7 274 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 NTNG1Q9Y2I2 539 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 KLF12Q9Y4X4 402 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 FGD5Q6ZNL6 1462 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 PATE3B3GLJ2 98 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 NEDD8-MDP1E9PL57 170 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 NME4O00746 187 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF207O43670 478 aaKnown RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 DUSP11O75319 330 aaKnown RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ALOX12BO75342 701 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 LYPD3O95274 346 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 SELEP16581 610 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 HCCSP53701 268 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 APOFQ13790 326 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 SPANXN4Q5MJ08 99 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 CCDC71Q8IV32 467 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 OR13D1Q8NGV5 346 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 GRPEL2Q8TAA5 225 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 HAVCR2Q8TDQ0 301 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF681Q96N22 645 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF2Q9BSG1 426 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 MAP1LC3AQ9H492 121 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 FKRPQ9H9S5 495 aa4.41□□□□□ -1.7
NIPBL-204ENST00000504430 AGO1Q9UL18 857 aaKnown RBP4.41□□□□□ -1.7
NIPBL-204ENST00000504430 A0A1B0GVG6 124 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 ANKRD20A5PA0PJZ0 165 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 NARSO43776 548 aaKnown RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 BCHEP06276 602 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 RBMY1CP0DJD4 496 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 THRAP10827 490 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 UCHL3P15374 230 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF17P17021 662 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 SDC1P18827 310 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 WARSP23381 471 aaKnown RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 GDF1P27539 372 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 MAGEA12P43365 314 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 SNAP25P60880 206 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 RPS27AP62979 156 aaKnown RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 PHF13Q86YI8 300 aaPredicted RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 OR52N5Q8NH56 324 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 OR5AK3PQ8NH89 298 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 AENQ8WTP8 325 aaKnown RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 EEF1AKMT3Q96AZ1 226 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 SCMH1Q96GD3 660 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 PPP1R2P1Q96PQ5 205 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 C20orf144Q9BQM9 153 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 CABLES2Q9BTV7 478 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms