RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 TPST2O60704 377 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 FMO6PO60774 539 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 SLC2A10O95528 541 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 UMPSP11172 480 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 BMP2P12643 396 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 TGFBR2P37173 567 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 FADDQ13158 208 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 C6orf10Q5SRN2 563 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 METTL11BQ5VVY1 283 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 CD276Q5ZPR3 534 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 C11orf87Q6NUJ2 197 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 TTC33Q6PID6 262 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 NFKBIDQ8NI38 313 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 LHX4Q969G2 390 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 CMBLQ96DG6 245 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 WDFY2Q96P53 400 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 EVA1AQ9H8M9 152 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 SMURF2Q9HAU4 748 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 TBCCD1Q9NVR7 557 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 UGT2A1Q9Y4X1 527 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 TIMM10BQ9Y5J6 103 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 PRORSD1PA6NEY8 169 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 BLOC1S5-TXNDC5H3BN57 136 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 CLIC1O00299 241 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 CHP2O43745 196 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 SERPINE1P05121 402 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 MMP9P14780 707 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 SRP9P49458 86 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 NPY4RP50391 375 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 PCBD1P61457 104 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF181Q2M3W8 571 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF613Q6PF04 617 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 LYPD2Q6UXB3 125 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 DCDC5Q6ZRR9 648 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 NANOGNBQ7Z5D8 188 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 ASB10Q8WXI3 467 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 NSMAFQ92636 917 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 MEGF10Q96KG7 1140 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 TECTBQ96PL2 329 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 POFUT1Q9H488 388 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 STX18Q9P2W9 335 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 NDRG4Q9ULP0 352 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 FAM96BQ9Y3D0 163 aa13.1□□□□□ -0.31
PDLIM7-210ENST00000503827 WDR91A4D1P6 747 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 GMNCA6NCL1 334 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 SLC22A3O75751 556 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 F13BP05160 661 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 CST2P09228 141 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 ASAH2BP0C7U1 165 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 EPHA3P29320 983 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 DAP3P51398 398 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 REEP3Q6NUK4 255 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF841Q6ZN19 808 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 PNLDC1Q8NA58 520 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 COG8Q96MW5 612 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 MCHR1Q99705 422 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 VPREB3Q9UKI3 123 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 USH1CQ9Y6N9 552 aa13.09□□□□□ -0.31
PDLIM7-210ENST00000503827 COL7A1Q02388 2944 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 KPNA4O00629 521 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 NR2C1P13056 603 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 IRF2P14316 349 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 LAP3P28838 519 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 ETV4P43268 484 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 SLC1A6P48664 564 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 UGT2B15P54855 530 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 CDK6Q00534 326 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 FMODQ06828 376 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 CD47Q08722 323 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 DBPQ10586 325 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 SLC35E4Q6ICL7 350 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 MSANTD1Q6ZTZ1 278 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 MOGAT3Q86VF5 341 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 OR5AS1Q8N127 324 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 OR10AD1Q8NGE0 317 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 ANP32BQ92688 251 aaKnown RBP13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 C16orf45Q96MC5 204 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 SORT1Q99523 831 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 STARD10Q9Y365 291 aa13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 CAB39Q9Y376 341 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-210ENST00000503827 TENM3Q9P273 2699 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 SDHDO14521 159 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 SERPINB7O75635 380 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 MPIG6BO95866 241 aa13.07□□□□□ -0.32
PDLIM7-210ENST00000503827 GABRA5P31644 462 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms