RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SLITRK2Q9H156 845 aa19.51■□□□□ 0.71
PTPN13-205ENST00000502971 POLE4Q9NR33 117 aa19.51■□□□□ 0.71
PTPN13-205ENST00000502971 TRBV5-7A0A0A0MS05 114 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 FAM166BA8MTA8 275 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 GUCA1AP43080 201 aaPredicted RBP19.5■□□□□ 0.71
PTPN13-205ENST00000502971 MAGEA5P43359 124 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 EVX1P49640 407 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 SRSF6Q13247 344 aaKnown RBP19.5■□□□□ 0.71
PTPN13-205ENST00000502971 TRIM16LQ309B1 348 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 SLC25A35Q3KQZ1 300 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 FOXL2NBQ6ZUU3 175 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 C20orf196Q8IYI0 205 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 ABRACLQ9P1F3 81 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 FOXD3Q9UJU5 478 aaPredicted RBP19.5■□□□□ 0.71
PTPN13-205ENST00000502971 GDF2Q9UK05 429 aaPredicted RBP19.5■□□□□ 0.71
PTPN13-205ENST00000502971 POLR1DQ9Y2S0 133 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 MSRB2Q9Y3D2 182 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 FLVCR1Q9Y5Y0 555 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 LHFPL6Q9Y693 200 aa19.5■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF716A6NP11 495 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 EPXP11678 715 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 CDAP32320 146 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 LHX2P50458 406 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 LSM6P62312 80 aaKnown RBP19.49■□□□□ 0.71
PTPN13-205ENST00000502971 MFGE8Q08431 387 aaPredicted RBP19.49■□□□□ 0.71
PTPN13-205ENST00000502971 CNIH2Q6PI25 160 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 GDPD1Q8N9F7 314 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 ZFP62Q8NB50 900 aaPredicted RBP19.49■□□□□ 0.71
PTPN13-205ENST00000502971 SOSTQ9BQB4 213 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 TCF7L1Q9HCS4 588 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 EMC7Q9NPA0 242 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 CENPMQ9NSP4 180 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 GTF2A1LQ9UNN4 478 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 SLC22A13Q9Y226 551 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 AK6Q9Y3D8 172 aaKnown RBP19.49■□□□□ 0.71
PTPN13-205ENST00000502971 MED13Q9UHV7 2174 aa19.49■□□□□ 0.71
PTPN13-205ENST00000502971 CYTIPO60759 359 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 CELA3AP09093 270 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 OCMP0CE72 109 aaPredicted RBP19.48■□□□□ 0.71
PTPN13-205ENST00000502971 MAGEB1P43366 347 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 SELENOPP49908 381 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF766Q5HY98 468 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 PHYHD1Q5SRE7 291 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 SLC22A16Q86VW1 577 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 RDH10Q8IZV5 341 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 TMEM178AQ8NBL3 297 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 ROBO4Q8WZ75 1007 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 B3GAT2Q9NPZ5 323 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 FBXL3Q9UKT7 428 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 SPTBN2O15020 2390 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 DHHO43323 396 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 ID4P47928 161 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 SOX2P48431 317 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 MMP16P51512 607 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 PPIAP62937 165 aaKnown RBP19.48■□□□□ 0.71
PTPN13-205ENST00000502971 CLN3Q13286 438 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 BCL2A1Q16548 175 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 KLHL24Q6TFL4 600 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 SYT9Q86SS6 491 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 LRRC28Q86X40 367 aaPredicted RBP19.48■□□□□ 0.71
PTPN13-205ENST00000502971 MEIOBQ8N635 442 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 ACKR4Q9NPB9 350 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 G6PC2Q9NQR9 355 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 OR52A1Q9UKL2 312 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 EMC9Q9Y3B6 208 aa19.48■□□□□ 0.71
PTPN13-205ENST00000502971 TMEM269A0A1B0GVZ9 245 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF891A8MT65 544 aaPredicted RBP19.47■□□□□ 0.71
PTPN13-205ENST00000502971 FAM25AB3EWG3 89 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 FAM25CB3EWG5 89 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 FAM25GB3EWG6 89 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF878C9JN71 531 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 SLC43A1O75387 559 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 SLC2A2P11168 524 aaPredicted RBP19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF708P17019 499 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ATF1P18846 271 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 WT1P19544 449 aaPredicted RBP19.47■□□□□ 0.71
PTPN13-205ENST00000502971 MSR1P21757 451 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 CCL11P51671 97 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 CLDN18P56856 261 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 DEFA1P59665 94 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 DEFA3P59666 94 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ODF4Q2M2E3 257 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 FCRLAQ7L513 359 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 OR8H2Q8N162 312 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 OR10AC1Q8NH08 325 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 TRMT10AQ8TBZ6 339 aaKnown RBP19.47■□□□□ 0.71
PTPN13-205ENST00000502971 TSEN15Q8WW01 171 aaKnown RBP19.47■□□□□ 0.71
PTPN13-205ENST00000502971 TMEM106AQ96A25 262 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ULBP2Q9BZM5 246 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 SLC6A15Q9H2J7 730 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 NELFAQ9H3P2 528 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 NIPAL2Q9H841 368 aa19.47■□□□□ 0.71
PTPN13-205ENST00000502971 PAQR5Q9NXK6 330 aaPredicted RBP19.47■□□□□ 0.71
PTPN13-205ENST00000502971 ISG15P05161 165 aa19.46■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF84P51523 738 aa19.46■□□□□ 0.71
PTPN13-205ENST00000502971 CDC20Q12834 499 aa19.46■□□□□ 0.71
PTPN13-205ENST00000502971 STAC2Q6ZMT1 411 aa19.46■□□□□ 0.71
PTPN13-205ENST00000502971 ZNF704Q6ZNC4 412 aaPredicted RBP19.46■□□□□ 0.71
PTPN13-205ENST00000502971 CFAP77Q6ZQR2 320 aa19.46■□□□□ 0.71
PTPN13-205ENST00000502971 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms