RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SLC25A37Q9NYZ2 338 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 ZIM2Q9NZV7 527 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 SLC13A4Q9UKG4 626 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 DNAH3Q8TD57 4116 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 PRORSD1PA6NEY8 169 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 CPSF4LA6NMK7 179 aaKnown RBP12.96□□□□□ -0.33
HDAC6-236ENST00000498808 FMO6PO60774 539 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 OPN1MWP04001 364 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 HIST1H2ABP04908 130 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 MMP9P14780 707 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 LAP3P28838 519 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 AQP1P29972 269 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 CFHR2P36980 270 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 POLR2JP52435 117 aaKnown RBP12.96□□□□□ -0.33
HDAC6-236ENST00000498808 PCBP3P57721 371 aaKnown RBP12.96□□□□□ -0.33
HDAC6-236ENST00000498808 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 TTC33Q6PID6 262 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-236ENST00000498808 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 HIST3H2AQ7L7L0 130 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 ALDH16A1Q8IZ83 802 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 NPEPL1Q8NDH3 523 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 HDAC2Q92769 488 aaKnown RBP12.96□□□□□ -0.33
HDAC6-236ENST00000498808 HIST1H2ACQ93077 130 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 CMBLQ96DG6 245 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF426Q9BUY5 554 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 C16orf95Q9H693 158 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 SDR39U1Q9NRG7 319 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-236ENST00000498808 ACOXLQ9NUZ1 547 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 CLN8Q9UBY8 286 aa12.96□□□□□ -0.33
HDAC6-236ENST00000498808 A0A1W2PRG6 482 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 P2RY10O00398 339 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 ABHD16AO95870 558 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 CST2P09228 141 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 IER3P46695 156 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 DAP3P51398 398 aaKnown RBP12.95□□□□□ -0.34
HDAC6-236ENST00000498808 BST1Q10588 318 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 STX3Q13277 289 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 SCARB2Q14108 478 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 ENTPD8Q5MY95 495 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 SLC25A47Q6Q0C1 308 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 ZNF841Q6ZN19 808 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 NLRC3Q7RTR2 1065 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 LDLRAD3Q86YD5 345 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 ARMC8Q8IUR7 673 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 SMYD1Q8NB12 490 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 OR6T1Q8NGN1 323 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 GATAD2BQ8WXI9 593 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 MEGF10Q96KG7 1140 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 EVA1AQ9H8M9 152 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 MEPEQ9NQ76 525 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-236ENST00000498808 TBCCD1Q9NVR7 557 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 TIMM10BQ9Y5J6 103 aa12.95□□□□□ -0.34
HDAC6-236ENST00000498808 IGHV3-64DA0A0J9YX35 117 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 PHYHO14832 338 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 HDAC3O15379 428 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 ENSAO43768 121 aaKnown RBP12.94□□□□□ -0.34
HDAC6-236ENST00000498808 FSTL3O95633 263 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 VSIG8P0DPA2 414 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 AQP2P41181 271 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 LOXL3P58215 753 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 CD47Q08722 323 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 IFFO1Q0D2I5 559 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 VAX1Q5SQQ9 334 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 ARL9Q6T311 187 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 RBM45Q8IUH3 476 aaKnown RBP12.94□□□□□ -0.34
HDAC6-236ENST00000498808 GOLGA6L1Q8N7Z2 621 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 GPR32P1Q8NGA4 272 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 OR4D11Q8NGI4 311 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 ADAMTS16Q8TE57 1224 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 HAVCR1Q96D42 359 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 INIPQ9NRY2 104 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 SLAMF8Q9P0V8 285 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 SLC7A7Q9UM01 511 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 STARD10Q9Y365 291 aa12.94□□□□□ -0.34
HDAC6-236ENST00000498808 A0A0U1RQK1 487 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 ZNF879B4DU55 563 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 SERPINB7O75635 380 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 TUBG1P23258 451 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 PMELP40967 661 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 EGR3Q06889 387 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 ENDOGQ14249 297 aaKnown RBP12.93□□□□□ -0.34
HDAC6-236ENST00000498808 DUSP7Q16829 419 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 LRIF1Q5T3J3 769 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 GDPGP1Q6ZNW5 385 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 OR5AS1Q8N127 324 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 CLDN22Q8N7P3 220 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 ATG16L2Q8NAA4 619 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 MOSPD2Q8NHP6 518 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 MAELQ96JY0 434 aaKnown RBP12.93□□□□□ -0.34
HDAC6-236ENST00000498808 PRSS27Q9BQR3 290 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 ROPN1BQ9BZX4 212 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-236ENST00000498808 IKZF5Q9H5V7 419 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 TMEM38AQ9H6F2 299 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms