RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 COL11A2P13942 1736 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 ASTN1O14525 1302 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 DOCK2Q92608 1830 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CEMIPQ8WUJ3 1361 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 KIR2DS5A0A0G2JLQ3 304 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 A0A0G2JNG1 304 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 C5orf63A6NC05 138 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RNF222A6NCQ9 220 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 EVPLLA8MZ36 301 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 C17orf105B2RV13 164 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD63C9JTQ0 380 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 F8W1H4 67 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 BIRC5O15392 142 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SLC31A2O15432 143 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PTBP3O95758 552 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 LY6G6DO95868 133 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SERPING1P05155 500 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SEC11BP0C7V7 166 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ITGA2P17301 1181 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CD247P20963 164 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 BCKDHBP21953 392 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 IL3RAP26951 378 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NAA10P41227 235 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 RBP2P50120 134 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CD47Q08722 323 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TMEM115Q12893 351 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 KLRB1Q12918 225 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 KIR2DS5Q14953 304 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TAF7Q15545 349 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 SMN1Q16637 294 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 ME3Q16798 604 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SYTL3Q4VX76 610 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CERCAMQ5T4B2 595 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 LRRC66Q68CR7 880 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FAHD2BQ6P2I3 314 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 C11orf57Q6ZUT1 292 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 DCXRQ7Z4W1 244 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GRAMD2AQ8IUY3 354 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CD302Q8IX05 232 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 LINC00518Q8N0U6 118 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 STX19Q8N4C7 294 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 WDSUB1Q8N9V3 476 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 OR4F5Q8NH21 305 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 UHMK1Q8TAS1 419 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 HTR3CQ8WXA8 447 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RSPH1Q8WYR4 309 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PPCDCQ96CD2 204 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ARSGQ96EG1 525 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 DTD2Q96FN9 168 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FAHD2AQ96GK7 314 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 C8orf76Q96K31 380 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PSKH2Q96QS6 385 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 OR4F4Q96R69 305 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ABHD1Q96SE0 405 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 DCUN1D5Q9BTE7 237 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RPP25Q9BUL9 199 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 TGIF2Q9GZN2 237 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 METTL17Q9H7H0 456 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 Q9N2J8 555 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FLRT3Q9NZU0 649 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 AMACRQ9UHK6 382 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CYB5R1Q9UHQ9 305 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RIMKLBQ9ULI2 386 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 NSD1Q96L73 2696 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 FREM3P0C091 2139 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ZMYM2Q9UBW7 1377 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 A0A1B0GUS0 222 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GXYLT2A0PJZ3 443 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 VSTM5A8MXK1 200 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TRIM24O15164 1050 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 FGF18O76093 207 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CA1P00915 261 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 JUNP05412 331 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 MYL1P05976 194 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 KRT13P13646 458 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ATP6V1B1P15313 513 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GCAP28676 217 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ALDH3A1P30838 453 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ATP4BP51164 291 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PHC1P78364 1004 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ARID5AQ03989 594 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PRDX1Q06830 199 aaKnown RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 NME3Q13232 169 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 IL18Q14116 193 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 GNA13Q14344 377 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 PTPRCAPQ14761 206 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SLC18A3Q16572 532 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 DCAF17Q5H9S7 520 aaPredicted RBP1.24□□□□□ -2.21
XRN1-214ENST00000498077 DCAF12L2Q5VW00 463 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ETFRF1Q6IPR1 90 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 LRRTM4Q86VH4 590 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TMEM219Q86XT9 240 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 MS4A15Q8N5U1 240 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 CCNYL1Q8N7R7 359 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 ARRDC2Q8TBH0 407 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 SLC41A3Q96GZ6 507 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 HPDLQ96IR7 371 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 RHOVQ96L33 236 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 TMEM56Q96MV1 263 aa1.24□□□□□ -2.21
XRN1-214ENST00000498077 KCNK16Q96T55 309 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms