RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 NUFIP2Q7Z417 695 aaKnown RBP12.48□□□□□ -0.41
VPS26A-209ENST00000497564 CD163Q86VB7 1156 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 CLVS1Q8IUQ0 354 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-209ENST00000497564 C9orf106Q8NAJ2 232 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 SNX33Q8WV41 574 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 ZFP3Q96NJ6 502 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 OR8B4Q96RC9 309 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 ABHD6Q9BV23 337 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 FUNDC2Q9BWH2 189 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 RBM24Q9BX46 236 aaKnown RBP12.48□□□□□ -0.41
VPS26A-209ENST00000497564 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 TRIM36Q9NQ86 728 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 ENPP5Q9UJA9 477 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
VPS26A-209ENST00000497564 METTL15A6NJ78 407 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 J3QLW9 94 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 CCL21O00585 134 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 KRT8P05787 483 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 TACSTD2P09758 323 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ABOP16442 354 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF19P17023 458 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 EDNRAP25101 427 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 CDAP32320 146 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 TGM4P49221 684 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ROR2Q01974 943 aaKnown RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 SSX1Q16384 188 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 TSTQ16762 297 aaKnown RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 CCDC58Q4VC31 144 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 TP53I3Q53FA7 332 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 FAM27BQ5VT28 67 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 GPR107Q5VW38 600 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 RTL6Q6ICC9 239 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 DEGS2Q6QHC5 323 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 RPTNQ6XPR3 784 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 SLC16A12Q6ZSM3 486 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 RHOUQ7L0Q8 258 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 P2RY8Q86VZ1 359 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 KLBQ86Z14 1044 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF100Q8IYN0 542 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 OR6K3Q8NGY3 331 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 OR52N5Q8NH56 324 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 RAB2BQ8WUD1 216 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 THEM6Q8WUY1 208 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 UFD1Q92890 307 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 PELI1Q96FA3 418 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 CCDC120Q96HB5 630 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 AMELYQ99218 206 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 WACQ9BTA9 647 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 TP63Q9H3D4 680 aaPredicted RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 NDUFB11Q9NX14 153 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 MRM2Q9UI43 246 aaKnown RBP12.47□□□□□ -0.41
VPS26A-209ENST00000497564 EMC9Q9Y3B6 208 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 DCHS2Q6V1P9 2916 aa12.47□□□□□ -0.41
VPS26A-209ENST00000497564 A0A1B0GUH1 482 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF587BE7ETH6 402 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 OGG1O15527 345 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF254O75437 659 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 KRT33AO76009 404 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 GABARAPO95166 117 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 CNOT4O95628 575 aaKnown RBP12.46□□□□□ -0.41
VPS26A-209ENST00000497564 CD1AP06126 327 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 CST2P09228 141 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 CD53P19397 219 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 TIMP3P35625 211 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 GBX2P52951 348 aaPredicted RBP12.46□□□□□ -0.41
VPS26A-209ENST00000497564 HIST1H3AP68431 136 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ENDOGQ14249 297 aaKnown RBP12.46□□□□□ -0.41
VPS26A-209ENST00000497564 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 HIST2H3PS2Q5TEC6 136 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 HIST2H3AQ71DI3 136 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 FAM220AQ7Z4H9 259 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 DCXRQ7Z4W1 244 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.46□□□□□ -0.41
VPS26A-209ENST00000497564 PHC2Q8IXK0 858 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF679Q8IYX0 411 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 RNF133Q8WVZ7 376 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 FOXB1Q99853 325 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ZNF416Q9BWM5 594 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 CDADC1Q9BWV3 514 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 C1orf198Q9H425 327 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.41
VPS26A-209ENST00000497564 ST6GALNAC2Q9UJ37 374 aa12.46□□□□□ -0.41
VPS26A-209ENST00000497564 GNG8Q9UK08 70 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms