RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PLP2Q04941 152 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 AQP6Q13520 282 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 OCLNQ16625 522 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 ZNF691Q5VV52 312 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 ENTHD1Q8IYW4 607 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 RHOXF1Q8NHV9 184 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 TFAP2CQ92754 450 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 RFKQ969G6 155 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 Q96MT0 163 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 ZNF582Q96NG8 517 aaPredicted RBP17.45■□□□□ 0.38
CTSD-206ENST00000497544 MRPL22Q9NWU5 206 aaKnown RBP17.45■□□□□ 0.38
CTSD-206ENST00000497544 ZNF224Q9NZL3 707 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 DNAJC27Q9NZQ0 273 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 KCNN3Q9UGI6 736 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 KCNG2Q9UJ96 466 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 ZNF503-AS2A6NEH8 195 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 CCDC182A6NF36 153 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 M0R1B8 84 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 ZNF593O00488 134 aaPredicted RBP17.44■□□□□ 0.38
CTSD-206ENST00000497544 ENTPD1P49961 510 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 SCRN3Q0VDG4 424 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 SLC25A30Q5SVS4 291 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 C6orf52Q5T4I8 152 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 LYPD4Q6UWN0 246 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 B3GLCTQ6Y288 498 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 ERI1Q8IV48 349 aaKnown RBP17.44■□□□□ 0.38
CTSD-206ENST00000497544 ALDH16A1Q8IZ83 802 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 C8orf59Q8N0T1 100 aaPredicted RBP17.44■□□□□ 0.38
CTSD-206ENST00000497544 FAM169BQ8N8A8 192 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 INTS14Q96SY0 518 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 WDR76Q9H967 626 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 ASH2LQ9UBL3 628 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 AASSQ9UDR5 926 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 COMMD3-BMI1R4GMX3 469 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 HSPE1-MOB4S4R3N1 261 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 RTTNQ86VV8 2226 aa17.44■□□□□ 0.38
CTSD-206ENST00000497544 IQCMA0A1B0GVH7 501 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 ENTPD6O75354 484 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 PTHP01270 115 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 MMP7P09237 267 aaPredicted RBP17.43■□□□□ 0.38
CTSD-206ENST00000497544 HTR1FP30939 366 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 RAB39AQ14964 217 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 BEX5Q5H9J7 111 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 LINC00346Q8IVM7 164 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 GJC3Q8NFK1 279 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 OR6N2Q8NGY6 317 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 MDFIQ99750 246 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 MARCH7Q9H992 704 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 NPAP1Q9NZP6 1156 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 WARS2Q9UGM6 360 aaKnown RBP17.43■□□□□ 0.38
CTSD-206ENST00000497544 FBXL3Q9UKT7 428 aa17.43■□□□□ 0.38
CTSD-206ENST00000497544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.43■□□□□ 0.38
CTSD-206ENST00000497544 SPARCP09486 303 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 GABRB1P18505 474 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 PTAFRP25105 342 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 IDH3GP51553 393 aaPredicted RBP17.42■□□□□ 0.38
CTSD-206ENST00000497544 PSG4Q00888 419 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 TMED1Q13445 227 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 MAD2L1BPQ15013 274 aaPredicted RBP17.42■□□□□ 0.38
CTSD-206ENST00000497544 DAZAP2Q15038 168 aaPredicted RBP17.42■□□□□ 0.38
CTSD-206ENST00000497544 C3orf36Q3SXR2 165 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 PABPC1L2AQ5JQF8 200 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 TEX30Q5JUR7 227 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 CORO6Q6QEF8 472 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 TMEM108Q6UXF1 575 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 SHFQ7M4L6 423 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 OR2H1Q9GZK4 316 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 ESRP2Q9H6T0 727 aaKnown RBP17.42■□□□□ 0.38
CTSD-206ENST00000497544 NOX3Q9HBY0 568 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 HAO2Q9NYQ3 351 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 CRNNQ9UBG3 495 aaPredicted RBP17.42■□□□□ 0.38
CTSD-206ENST00000497544 CYB5R1Q9UHQ9 305 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 LHFPL6Q9Y693 200 aa17.42■□□□□ 0.38
CTSD-206ENST00000497544 MAP1AP78559 2803 aaPredicted RBP17.41■□□□□ 0.38
CTSD-206ENST00000497544 SGCEO43556 437 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 IGKV3-15P01624 115 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 SERPINA5P05154 406 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 GNAO1P09471 354 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 ATP6V1E1P36543 226 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 NAA10P41227 235 aaPredicted RBP17.41■□□□□ 0.38
CTSD-206ENST00000497544 RPS27P42677 84 aaKnown RBP17.41■□□□□ 0.38
CTSD-206ENST00000497544 ART1P52961 327 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 ISL1P61371 349 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 THAP5Q7Z6K1 395 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 TIGD4Q8IY51 512 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 AKR7LQ8NHP1 331 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 PLPPR2Q96GM1 343 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 KCNS3Q9BQ31 491 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 PLEK2Q9NYT0 353 aa17.41■□□□□ 0.38
CTSD-206ENST00000497544 CADP27708 2225 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 IGHV1-18A0A0C4DH31 117 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.4■□□□□ 0.38
CTSD-206ENST00000497544 RER1O15258 196 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 SELENOFO60613 162 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 IGLV1-44P01699 117 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 ZNF14P17017 642 aaPredicted RBP17.4■□□□□ 0.38
CTSD-206ENST00000497544 CD40P25942 277 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 NR1H2P55055 460 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 NCMAPQ5T1S8 102 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 SLC18B1Q6NT16 456 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms