RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 NIPAL3Q6P499 406 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 PLBD1Q6P4A8 553 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 IGFL3Q6UXB1 125 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 TMPPEQ6ZT21 453 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ASB18Q6ZVZ8 466 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 NANOGNBQ7Z5D8 188 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 WDFY1Q8IWB7 410 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ARIH2OSQ8N7S6 290 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ZNF485Q8NCK3 441 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ZNF248Q8NDW4 579 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 FAM83FQ8NEG4 500 aaPredicted RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 OR52I1Q8NGK6 324 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 OR13F1Q8NGS4 319 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ZNF519Q8TB69 540 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ZPLD1Q8TCW7 415 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ZNRF4Q8WWF5 429 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 KCNE4Q8WWG9 221 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 HIST1H2ACQ93077 130 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 SLC25A36Q96CQ1 311 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 DDIT4LQ96D03 193 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 PLEKHA8Q96JA3 519 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 Q96M85 177 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 JSRP1Q96MG2 331 aaPredicted RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 TUBA1CQ9BQE3 449 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 PIGQQ9BRB3 760 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 TEX12Q9BXU0 123 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 MED20Q9H944 212 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 CHST11Q9NPF2 352 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ACOT13Q9NPJ3 140 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 INIPQ9NRY2 104 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ALKBH4Q9NXW9 302 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 HAO2Q9NYQ3 351 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 B3GAT1Q9P2W7 334 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 WARS2Q9UGM6 360 aaKnown RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 KLHL21Q9UJP4 597 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 BOKQ9UMX3 212 aaPredicted RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 DIMT1Q9UNQ2 313 aaKnown RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 B3GALT5Q9Y2C3 310 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 RPH3AQ9Y2J0 694 aaPredicted RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 KLF13Q9Y2Y9 288 aaPredicted RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 LSM2Q9Y333 95 aaKnown RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 HDGFL3Q9Y3E1 203 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ADAM18Q9Y3Q7 739 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 SPIN1Q9Y657 262 aaPredicted RBP4.73□□□□□ -1.65
GGPS1-208ENST00000497327 CEPT1Q9Y6K0 416 aa4.73□□□□□ -1.65
GGPS1-208ENST00000497327 ALPK2Q86TB3 2170 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 A0A0J9YW62 118 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 TRIM64BA6NI03 449 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 AQP7P3A6NL99 342 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 SNTNA6NMZ2 147 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 ZNF99A8MXY4 864 aaPredicted RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 H3BSA7 217 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 KLK10O43240 276 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 TRAF3IP2O43734 574 aaPredicted RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 INMTO95050 263 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 AKR7A3O95154 331 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 PTHP01270 115 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 IFNGP01579 166 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 OPN1LWP04000 364 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 LCKP06239 509 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 LIMS3P0CW19 117 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 LIMS4P0CW20 117 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 ADORA3P0DMS8 318 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 CLUP10909 449 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 HLA-DOBP13765 273 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 KLK2P20151 261 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 TCEA1P23193 301 aaKnown RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 EIF2S3P41091 472 aaKnown RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 MTNR1AP48039 350 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 CCL11P51671 97 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 SUCLG1P53597 346 aaKnown RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 CLDN15P56746 228 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 RPL27P61353 136 aaKnown RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 RUNX1T1Q06455 604 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 PUDPQ08623 228 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 RAB40BQ12829 278 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 GGTLC2Q14390 218 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 NEDD8Q15843 81 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 ACKR1Q16570 336 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 LINC01590Q5TEZ4 76 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 EEF1A1P5Q5VTE0 462 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 RAET1LQ5VY80 246 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 C19orf48Q6RUI8 117 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 GALNTL5Q7Z4T8 443 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 PXKQ7Z7A4 578 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 YRDCQ86U90 279 aaKnown RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 GID4Q8IVV7 300 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 STX19Q8N4C7 294 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 TMEM251Q8N6I4 163 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 TMEM99Q8N816 258 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 CYB561A3Q8NBI2 242 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 LSM14AQ8ND56 463 aaKnown RBP4.72□□□□□ -1.65
GGPS1-208ENST00000497327 SDR9C7Q8NEX9 313 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 ATP6V1C2Q8NEY4 427 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 OR52E2Q8NGJ4 325 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 OR4K13Q8NH42 304 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
GGPS1-208ENST00000497327 C9orf43Q8TAL5 461 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms