RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	CORO2B	Q9UQ03	480 aa		13.87	□□□□□ -0.19
SUPT20H-223	ENST00000497318	CPSF4L	A6NMK7	179 aa	Known RBP	13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ABHD16A	O95870	558 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	F13B	P05160	661 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	AQP1	P29972	269 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ERVK-25	P63136	954 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	C2orf68	Q2NKX9	166 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	PAGE3	Q5JUK9	113 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	OR8B3	Q8NGG8	313 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ITLN1	Q8WWA0	313 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ASB10	Q8WXI3	467 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	NEIL1	Q96FI4	390 aa	Predicted RBP	13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	COG8	Q96MW5	612 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	OR8B2	Q96RD0	313 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	WNT5B	Q9H1J7	359 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	IKZF5	Q9H5V7	419 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	INIP	Q9NRY2	104 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	NDRG4	Q9ULP0	352 aa	Known RBP	13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ANGPT4	Q9Y264	503 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	UGT2A1	Q9Y4X1	527 aa		13.86	□□□□□ -0.19
SUPT20H-223	ENST00000497318	TRAPPC13	A5PLN9	417 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	LRRC30	A6NM36	301 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	EVPLL	A8MZ36	301 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318		M0R3H8	397 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	CLPX	O76031	633 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	SLC2A10	O95528	541 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	CST2	P09228	141 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	KITLG	P21583	273 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	IDH3A	P50213	366 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	UGT2B15	P54855	530 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	RPL18	Q07020	188 aa	Known RBP	13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	CD47	Q08722	323 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	HNRNPA0	Q13151	305 aa	Known RBP	13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	NPTX1	Q15818	432 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ENTPD8	Q5MY95	495 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ZNF774	Q6NX45	483 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ATG16L2	Q8NAA4	619 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	NSMAF	Q92636	917 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	NABP1	Q96AH0	204 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	RBP7	Q96R05	134 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	OR2V2	Q96R30	315 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	TMEM165	Q9HC07	324 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	GCM1	Q9NP62	436 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	TBCCD1	Q9NVR7	557 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	SLC7A7	Q9UM01	511 aa		13.85	□□□□□ -0.19
SUPT20H-223	ENST00000497318	C12orf71	A8MTZ7	269 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	MELTF	P08582	738 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	PITPNB	P48739	271 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	MMP16	P51512	607 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	FGF12	P61328	243 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	VASH1	Q7L8A9	365 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	C1orf87	Q8N0U7	546 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	SMYD1	Q8NB12	490 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	LINC01006	Q8NI28	216 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	FNDC8	Q8TC99	324 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	ADAMTS16	Q8TE57	1224 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	DACT3	Q96B18	629 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	CMBL	Q96DG6	245 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	CLN8	Q9UBY8	286 aa		13.84	□□□□□ -0.19
SUPT20H-223	ENST00000497318	C5orf63	A6NC05	138 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	C3orf80	F5H4A9	247 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ENSA	O43768	121 aa	Known RBP	13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	FSTL3	O95633	263 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TSPAN15	O95858	294 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	FUT1	P19526	365 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	LAP3	P28838	519 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SRP9	P49458	86 aa	Known RBP	13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	KRTAP10-3	P60369	221 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	STX1B	P61266	288 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	ARMC4	Q5T2S8	1044 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	LRIF1	Q5T3J3	769 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	BLOC1S3	Q6QNY0	202 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318		Q6ZR03	302 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	SYT9	Q86SS6	491 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	OR6T1	Q8NGN1	323 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GATAD2B	Q8WXI9	593 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	HAVCR1	Q96D42	359 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	WAC	Q9BTA9	647 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TRIM15	Q9C019	465 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	CCDC167	Q9P0B6	97 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	VAPA	Q9P0L0	249 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GMEB1	Q9Y692	573 aa		13.83	□□□□□ -0.2
SUPT20H-223	ENST00000497318	NPIPB13	A6NJU9	1138 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	NPIPB4	C9JG80	1138 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	P2RY10	O00398	339 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	TNFRSF13B	O14836	293 aa	Predicted RBP	13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PIN1P1	O15428	100 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	COX5B	P10606	129 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GPX2	P18283	190 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	RBMX	P38159	391 aa	Known RBP	13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	AQP2	P41181	271 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PROK1	P58294	105 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	GUCY1A3	Q02108	690 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	REC114	Q7Z4M0	266 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	FITM2	Q8N6M3	262 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	C11orf65	Q8NCR3	313 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	PTP4A1	Q93096	173 aa		13.82	□□□□□ -0.2
SUPT20H-223	ENST00000497318	NMD3	Q96D46	503 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms