RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PCBD1P61457 104 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 ERVK-25P63136 954 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 IFFO1Q0D2I5 559 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 ZNF404Q494X3 552 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 ENTPD8Q5MY95 495 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 ARMC4Q5T2S8 1044 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 GCNT6Q5T4J0 391 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 SLC25A47Q6Q0C1 308 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 ARMC8Q8IUR7 673 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 C10orf111Q8N326 155 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 GOLGA6L1Q8N7Z2 621 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 OR8B3Q8NGG8 313 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 FNDC8Q8TC99 324 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 ADAMTS16Q8TE57 1224 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 COG8Q96MW5 612 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 TMEM246Q9BRR3 403 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 TNFRSF19Q9NS68 423 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 SLC25A37Q9NYZ2 338 aa11.19□□□□□ -0.62
COL1A1-209ENST00000495677 NDRG4Q9ULP0 352 aaKnown RBP11.19□□□□□ -0.62
COL1A1-209ENST00000495677 IGKV1D-43A0A0B4J1Z2 117 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 MCIDASD6RGH6 385 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 P2RY10O00398 339 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 PHYHO14832 338 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 GPR137BO60478 399 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 SLC2A10O95528 541 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 F13BP05160 661 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 THRBP10828 461 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 FGF12P61328 243 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 RPL18Q07020 188 aaKnown RBP11.18□□□□□ -0.62
COL1A1-209ENST00000495677 BST1Q10588 318 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 SCARB2Q14108 478 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 TAF11Q15544 211 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 SGCAQ16586 387 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 DUSP7Q16829 419 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 SAMD5Q5TGI4 173 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 ZNF841Q6ZN19 808 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 FOXL2NBQ6ZUU3 175 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 NLRC3Q7RTR2 1065 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 NANOGNBQ7Z5D8 188 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 LDLRAD3Q86YD5 345 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 OR6T1Q8NGN1 323 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 FAM110DQ8TAY7 271 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-209ENST00000495677 LIPHQ8WWY8 451 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 PTP4A1Q93096 173 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 PCDHAC1Q9H158 963 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 MEPEQ9NQ76 525 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-209ENST00000495677 ACOXLQ9NUZ1 547 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 CLN8Q9UBY8 286 aa11.18□□□□□ -0.62
COL1A1-209ENST00000495677 CENPVL3A0A0U1RRI6 287 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 TRAPPC13A5PLN9 417 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 G3V4G9 280 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 TSPAN9O75954 239 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 OPN1MWP04001 364 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 CSF1P09603 554 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 OPN1MW2P0DN77 364 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 OPN1MW3P0DN78 364 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 UMPSP11172 480 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 MMP9P14780 707 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 IER3P46695 156 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 MRPL19P49406 292 aaKnown RBP11.17□□□□□ -0.62
COL1A1-209ENST00000495677 NPY4RP50391 375 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 PCBP3P57721 371 aaKnown RBP11.17□□□□□ -0.62
COL1A1-209ENST00000495677 NPTX1Q15818 432 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 WDR25Q64LD2 544 aaPredicted RBP11.17□□□□□ -0.62
COL1A1-209ENST00000495677 SLC2A7Q6PXP3 512 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 GDPGP1Q6ZNW5 385 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 Q6ZSV7 163 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 MSRB3Q8IXL7 192 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 C1orf87Q8N0U7 546 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 OR9I1Q8NGQ6 314 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 HDAC2Q92769 488 aaKnown RBP11.17□□□□□ -0.62
COL1A1-209ENST00000495677 CMBLQ96DG6 245 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 INIPQ9NRY2 104 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
COL1A1-209ENST00000495677 J3QW42 95 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 M0R3H8 397 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 UBDO15205 165 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
COL1A1-209ENST00000495677 ABHD16AO95870 558 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 MT-ND1P03886 318 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 VIMP08670 466 aaKnown RBP11.16□□□□□ -0.62
COL1A1-209ENST00000495677 RAC2P15153 192 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 FUT1P19526 365 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 LAP3P28838 519 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 CFHR2P36980 270 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 PSMB10P40306 273 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 PITPNBP48739 271 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 RUSC1-AS1Q66K80 236 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 NXNQ6DKJ4 435 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 DCDC5Q6ZRR9 648 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 ZNF420Q8TAQ5 688 aaPredicted RBP11.16□□□□□ -0.62
COL1A1-209ENST00000495677 GATAD2BQ8WXI9 593 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 PPP1R14AQ96A00 147 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 RBP7Q96R05 134 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 PRSS27Q9BQR3 290 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 TRIM15Q9C019 465 aa11.16□□□□□ -0.62
COL1A1-209ENST00000495677 TXNIPQ9H3M7 391 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms