RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 AIREO43918 545 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 FARS2O95363 451 aaKnown RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 IGHV3-9P01782 118 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 CELP19835 753 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 GADD45AP24522 165 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 EDNRAP25101 427 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 RIDAP52758 137 aaKnown RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 SIRPAP78324 504 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ENDOGQ14249 297 aaKnown RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 CDK5R1Q15078 307 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 PRR30Q53SZ7 412 aaPredicted RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 LIPNQ5VXI9 398 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 OTPQ5XKR4 325 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 DMKNQ6E0U4 476 aaPredicted RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 RTL6Q6ICC9 239 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ZNF544Q6NX49 715 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 CORO6Q6QEF8 472 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 GDPGP1Q6ZNW5 385 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 SYT9Q86SS6 491 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 UBE2J2Q8N2K1 259 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 SLC22A24Q8N4F4 322 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ZFP41Q8N8Y5 198 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 GJC3Q8NFK1 279 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 RPS4Y2Q8TD47 263 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 SLAMF6Q96DU3 332 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ZNF837Q96EG3 531 aaPredicted RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 NAA50Q9GZZ1 169 aaKnown RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 C12orf49Q9H741 205 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ELOVL3Q9HB03 270 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 SLCO1C1Q9NYB5 712 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ASH2LQ9UBL3 628 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 ST6GALNAC2Q9UJ37 374 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 STUB1Q9UNE7 303 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 SF3B6Q9Y3B4 125 aaKnown RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 FAM215AQ9Y5M1 114 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 TPRP12270 2363 aaKnown RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 ZZEF1O43149 2961 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 TTLL8A6PVC2 850 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 ZNF878C9JN71 531 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 E9PI62 339 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 PSMD9O00233 223 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 SLC22A1O15245 554 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 GPRIN2O60269 458 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 IL2RAP01589 272 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 H2BFMP0C1H6 154 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 TMIGD3P0DMS9 266 aaPredicted RBP9.69□□□□□ -0.86
PKP4-215ENST00000494945 B4GALT1P15291 398 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 GALP22466 123 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 MPGP29372 298 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 DCTDP32321 178 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 OPRL1P41146 370 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 KIR2DL2P43627 348 aaPredicted RBP9.69□□□□□ -0.86
PKP4-215ENST00000494945 ATRXP46100 2492 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 PER3P56645 1201 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 PCBD1P61457 104 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 HIST1H3AP68431 136 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 ARF1P84077 181 aaKnown RBP9.69□□□□□ -0.86
PKP4-215ENST00000494945 FAPQ12884 760 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 CTF1Q16619 201 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 HIST2H3PS2Q5TEC6 136 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 MYO7BQ6PIF6 2116 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 LRRN1Q6UXK5 716 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 TFAP2EQ6VUC0 442 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 ZNF813Q6ZN06 617 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 CFAP77Q6ZQR2 320 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 SEM1Q6ZVN7 128 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 HIST2H3AQ71DI3 136 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.69□□□□□ -0.86
PKP4-215ENST00000494945 GCNT2Q8N0V5 402 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 LRRC18Q8N456 261 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 CNEP1R1Q8N9A8 125 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 C12orf43Q96C57 262 aaKnown RBP9.69□□□□□ -0.86
PKP4-215ENST00000494945 SMIM19Q96E16 107 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 COQ7Q99807 217 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 KCNN2Q9H2S1 579 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 NIPAL2Q9H841 368 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 PRSS50Q9UI38 385 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 GRIP1Q9Y3R0 1128 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 LRP12Q9Y561 859 aa9.69□□□□□ -0.86
PKP4-215ENST00000494945 SIRT4Q9Y6E7 314 aaPredicted RBP9.69□□□□□ -0.86
PKP4-215ENST00000494945 SPTA1P02549 2419 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 PCNX1Q96RV3 2341 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 USP24Q9UPU5 2620 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 TRBV2A0A0J9YWF9 115 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 PNMA8CA0A1B0GUJ8 204 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 TRIM64BA6NI03 449 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 SLC19A2O60779 497 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 TNFSF13O75888 250 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 RPP14O95059 124 aaKnown RBP9.68□□□□□ -0.86
PKP4-215ENST00000494945 HLA-DPB1P04440 258 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 CEACAM8P31997 349 aaPredicted RBP9.68□□□□□ -0.86
PKP4-215ENST00000494945 PSMB10P40306 273 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 CRYBB2P43320 205 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 GDI2P50395 445 aaKnown RBP9.68□□□□□ -0.86
PKP4-215ENST00000494945 CCR9P51686 369 aa9.68□□□□□ -0.86
PKP4-215ENST00000494945 RPS25P62851 125 aaKnown RBP9.68□□□□□ -0.86
PKP4-215ENST00000494945 GRB2P62993 217 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms