RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FAM131CQ96AQ9 280 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 C8orf44Q96CB5 159 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 ASB16Q96NS5 453 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 MRPL22Q9NWU5 206 aaKnown RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 MYO9BQ13459 2157 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 H0YIZ8 118 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 CLPSP04118 112 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 CRHP06850 196 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 DCNP07585 359 aaKnown RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 TACR3P29371 465 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 SKP2Q13309 424 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 SGCGQ13326 291 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 ZNHIT3Q15649 155 aaPredicted RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 SMAD2Q15796 467 aaKnown RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 PRAMEF17Q5VTA0 474 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 ADGRE4PQ86SQ3 457 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 CD163Q86VB7 1156 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 GTPBP8Q8N3Z3 284 aaPredicted RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 GATSQ8NAP1 163 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 OR10G6Q8NH81 332 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 UQCC1Q9NVA1 299 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 MYEF2Q9P2K5 600 aaKnown RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 FREM3P0C091 2139 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 LOC390937A0A1W2PQ73 354 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 FITM1A5D6W6 292 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 COLCA2A8K830 154 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 EFSO43281 561 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 OR10H2O60403 315 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 CSN2P05814 226 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 PRKXP51817 358 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 WBP2NLQ6ICG8 309 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 PSRC1Q6PGN9 363 aaPredicted RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 SPRED2Q7Z698 418 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 ZFP82Q8N141 532 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 ZSCAN4Q8NAM6 433 aaPredicted RBP13.8□□□□□ -0.2
SDF4-207ENST00000494748 FOXN4Q96NZ1 517 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 RNF122Q9H9V4 155 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 MMP26Q9NRE1 261 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 TMEM14AQ9Y6G1 99 aa13.8□□□□□ -0.2
SDF4-207ENST00000494748 ATG2AQ2TAZ0 1938 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 ARPC4-TTLL3A0A0A6YYG9 625 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 PLRG1O43660 514 aaKnown RBP13.79□□□□□ -0.2
SDF4-207ENST00000494748 PRKNO60260 465 aaPredicted RBP13.79□□□□□ -0.2
SDF4-207ENST00000494748 ADH1BP00325 375 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 GPR3P46089 330 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 NAAAQ02083 359 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 HABP2Q14520 560 aaPredicted RBP13.79□□□□□ -0.2
SDF4-207ENST00000494748 PDGFRLQ15198 375 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 ZNF260Q3ZCT1 412 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 MDGA2Q7Z553 956 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 CATSPERDQ86XM0 798 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 GVQW1Q8N7I0 195 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 ZDHHC22Q8N966 263 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 ZNF208O43345 1280 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 WISP1O95388 367 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 IFNA4P05014 189 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 GLAP06280 429 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 ROM1Q03395 351 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 PHF19Q5T6S3 580 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 RTN4RL2Q86UN3 420 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 ZNF679Q8IYX0 411 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 THRSPQ92748 146 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 TAAR8Q969N4 342 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 RERGQ96A58 199 aaPredicted RBP13.79□□□□□ -0.2
SDF4-207ENST00000494748 ELSPBP1Q96BH3 223 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 CCNL2Q96S94 520 aaPredicted RBP13.79□□□□□ -0.2
SDF4-207ENST00000494748 G6PC3Q9BUM1 346 aa13.79□□□□□ -0.2
SDF4-207ENST00000494748 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
SDF4-207ENST00000494748 PHYHO14832 338 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 AVPI1Q5T686 147 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 PGAP1Q75T13 922 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 BHLHE23Q8NDY6 225 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 OR4K17Q8NGC6 315 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 OR9A4Q8NGU2 314 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 C16orf52Q8NHV5 167 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 SPPL3Q8TCT6 385 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 ARL11Q969Q4 196 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 B9D1Q9UPM9 204 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 CSAG2Q9Y5P2 127 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 A0A0A6YYH2 397 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 A6NJ64 397 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 SNAPINO95295 136 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 PNMTP11086 282 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 PPP1CAP62136 330 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.78□□□□□ -0.2
SDF4-207ENST00000494748 OR52W1Q6IF63 320 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 FJX1Q86VR8 437 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 BAP18Q8IXM2 172 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 SPAG16Q8N0X2 631 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 C10orf53Q8N6V4 93 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 INO80EQ8NBZ0 244 aaPredicted RBP13.78□□□□□ -0.2
SDF4-207ENST00000494748 OR4D6Q8NGJ1 314 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 CNTNAP3BQ96NU0 1288 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 PHF3Q92576 2039 aaKnown RBP13.78□□□□□ -0.2
SDF4-207ENST00000494748 TRANK1O15050 2925 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms