RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 NR2C1P13056 603 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 MSR1P21757 451 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 GUCA1AP43080 201 aaPredicted RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 GPR4P46093 362 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 PCBD1P61457 104 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 CDK5R2Q13319 367 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 ZMYND11Q15326 602 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 ZMAT1Q5H9K5 638 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 KLF17Q5JT82 389 aaPredicted RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 Q6ZR03 302 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 OR5AS1Q8N127 324 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 OR8J3Q8NGG0 315 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 C10orf82Q8WW14 230 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 STON2Q8WXE9 905 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 PRRC1Q96M27 445 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 C1orf147Q96MC9 270 aaPredicted RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 ZNF48Q96MX3 618 aaPredicted RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 TMEM120AQ9BXJ8 343 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 POLR2J2Q9GZM3 115 aaKnown RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 POLR2J3Q9H1A7 115 aaKnown RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 RERGLQ9H628 205 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 NTN4Q9HB63 628 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 POLE4Q9NR33 117 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 ADAM18Q9Y3Q7 739 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 SNX13Q9Y5W8 968 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 IGHV3-64DA0A0J9YX35 117 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 EFCAB9A8MZ26 197 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 H3BSA7 217 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 HKR1P10072 659 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 THRBP10828 461 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 GSTM3P21266 225 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 LIPAP38571 399 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 BTG1P62324 171 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 ST3GAL3Q11203 375 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 ZNF154Q13106 437 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 BAMBIQ13145 260 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 FHL1Q13642 323 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 ERICH5Q6P6B1 374 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 FOXL2NBQ6ZUU3 175 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 VTCN1Q7Z7D3 282 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 KLHL36Q8N4N3 616 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 SPICQ8N5J4 248 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 POP5Q969H6 163 aaKnown RBP10.64□□□□□ -0.71
SKA1-205ENST00000494518 CMBLQ96DG6 245 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 SIGLEC11Q96RL6 698 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 DIRC2Q96SL1 478 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 SH3GL1Q99961 368 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 PATZ1Q9HBE1 687 aaKnown RBP10.64□□□□□ -0.71
SKA1-205ENST00000494518 MAN2C1Q9NTJ4 1040 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 CGGBP1Q9UFW8 167 aaPredicted RBP10.64□□□□□ -0.71
SKA1-205ENST00000494518 NUP50Q9UKX7 468 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 NDRG4Q9ULP0 352 aaKnown RBP10.64□□□□□ -0.71
SKA1-205ENST00000494518 STARD10Q9Y365 291 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 AUP1Q9Y679 476 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 NOTCH1P46531 2555 aa10.64□□□□□ -0.71
SKA1-205ENST00000494518 LOC100653049A0A140TA62 436 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 A6NIZ1 184 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 FAM220BPB1ANY3 271 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 IMPA2O14732 288 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 KRT34O76011 436 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 IFNA14P01570 189 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 ZNF12P17014 697 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 TNFSF4P23510 183 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 PRTN3P24158 256 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 KDELR2P33947 212 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 RPL4P36578 427 aaKnown RBP10.63□□□□□ -0.71
SKA1-205ENST00000494518 SLC9A3P48764 834 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 RAP1BP61224 184 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 RAP1AP62834 184 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 FOXL1Q12952 345 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 KLF10Q13118 480 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 MESTQ5EB52 335 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 FAM205BPQ63HN1 556 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 TBPL2Q6SJ96 375 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 ARL9Q6T311 187 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 DOK3Q7L591 496 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.63□□□□□ -0.71
SKA1-205ENST00000494518 OAFQ86UD1 273 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 ZNF283Q8N7M2 679 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 OR10AD1Q8NGE0 317 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 ZNF420Q8TAQ5 688 aaPredicted RBP10.63□□□□□ -0.71
SKA1-205ENST00000494518 Q96M85 177 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 OR2V2Q96R30 315 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 MRI1Q9BV20 369 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 ZNF747Q9BV97 191 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 UNKLQ9H9P5 680 aaKnown RBP10.63□□□□□ -0.71
SKA1-205ENST00000494518 PLEK2Q9NYT0 353 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 PTTG3PQ9NZH4 202 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 PPP1R3CQ9UQK1 317 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 INSIG2Q9Y5U4 225 aa10.63□□□□□ -0.71
SKA1-205ENST00000494518 PPIAL4EA0A075B759 164 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 PPIAL4CA0A0B4J2A2 164 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 MDFIC2A0A1B0GVS7 189 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 PPIAL4DF5H284 164 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 SGCEO43556 437 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 ICMTO60725 284 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 ZNF682O95780 498 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms