RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PTBP1P26599 531 aaKnown RBP eCLIP5.99□□□□□ -1.45
MSH5-217ENST00000494458 TNFSF8P32971 234 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 PSMB10P40306 273 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 EIF1AXP47813 144 aaKnown RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 SELENOPP49908 381 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 CLRN1P58418 232 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 SLC3A1Q07837 685 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 RIN1Q13671 783 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 EIF2B1Q14232 305 aaKnown RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 ZNF846Q147U1 533 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 RNPS1Q15287 305 aaKnown RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 DEFB109BQ30KR1 87 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 Q499Y3 187 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 WDR38Q5JTN6 314 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 LINGO2Q7L985 606 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 DCXRQ7Z4W1 244 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 CEACAM19Q7Z692 300 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 MEIOBQ8N635 442 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 YIPF7Q8N8F6 280 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 OR5AK2Q8NH90 309 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 THEM6Q8WUY1 208 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 ACOT12Q8WYK0 555 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 ROBO4Q8WZ75 1007 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 THRSPQ92748 146 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 PNPLA2Q96AD5 504 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 ZNF845Q96IR2 970 aaPredicted RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 CMTM3Q96MX0 182 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 DERL3Q96Q80 235 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 SDHCQ99643 169 aaPredicted RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 ATF6BQ99941 703 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 PDCD1LG2Q9BQ51 273 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 SCNM1Q9BWG6 230 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 SLC6A15Q9H2J7 730 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 MIXL1Q9H2W2 232 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 NELFAQ9H3P2 528 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 C1orf198Q9H425 327 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 HMG20AQ9NP66 347 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 EXOSC4Q9NPD3 245 aaKnown RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 SPRR3Q9UBC9 169 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 CRNNQ9UBG3 495 aaPredicted RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 GDF2Q9UK05 429 aaPredicted RBP5.99□□□□□ -1.45
MSH5-217ENST00000494458 LRP12Q9Y561 859 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 LIPGQ9Y5X9 500 aa5.99□□□□□ -1.45
MSH5-217ENST00000494458 AKAP13Q12802 2813 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 A0A087WV48 116 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 TRGV5A0A0B4J1U4 118 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 A0A1B0GTH9 108 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PNMA8CA0A1B0GUJ8 204 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 CD8B2A6NJW9 211 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 FAM166BA8MTA8 275 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 NOTOA8MTQ0 251 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 VGLL3A8MV65 326 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 K7ENP7 123 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PSMD9O00233 223 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 SLC43A1O75387 559 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 HLA-DQA2P01906 255 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ITGB2P05107 769 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 CST2P09228 141 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 SPARCP09486 303 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 EPXP11678 715 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 IGFBP3P17936 291 aaPredicted RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 SRMP19623 302 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 MSR1P21757 451 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PEX19P40855 299 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 RFC3P40938 356 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 EIF2S3P41091 472 aaKnown RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 RIDAP52758 137 aaKnown RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 IFITM3Q01628 133 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PLGLB1Q02325 96 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 TOMM20Q15388 145 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 INAQ16352 499 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 CCDC92Q53HC0 331 aaPredicted RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 FAM27D1Q5T7N8 215 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ASPHD2Q6ICH7 369 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 FAM166AQ6J272 317 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ZNF529Q6P280 563 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 INO80CQ6PI98 192 aaPredicted RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 METAP1DQ6UB28 335 aaPredicted RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 LRRN1Q6UXK5 716 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 LRRC69Q6ZNQ3 347 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 CFAP77Q6ZQR2 320 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 KRT74Q7RTS7 529 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 AAED1Q7RTV5 226 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 FAM220AQ7Z4H9 259 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 LRRTM1Q86UE6 522 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ELMOD2Q8IZ81 293 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 GPR137CQ8N3F9 429 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PARP16Q8N5Y8 322 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PLPP7Q8NBV4 271 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 GJC3Q8NFK1 279 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 GPR148Q8TDV2 347 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ASB5Q8WWX0 329 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 NSMAFQ92636 917 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 RELTQ969Z4 430 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 SLAMF6Q96DU3 332 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ZNF837Q96EG3 531 aaPredicted RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 TAAR6Q96RI8 345 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 GFI1Q99684 422 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 ZNF416Q9BWM5 594 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PPP1R3EQ9H7J1 279 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms