RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 SMARCD2Q92925 531 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 LRRC58Q96CX6 371 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 TBC1D31Q96DN5 1066 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 COQ2Q96H96 371 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 BMFQ96LC9 184 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 C12orf42Q96LP6 360 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 RTBDNQ9BSG5 229 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 TIPINQ9BVW5 301 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 EXD2Q9NVH0 621 aa3.98□□□□□ -1.77
HMGB3P14-201ENST00000494195 TET2Q6N021 2002 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 FOXH1O75593 365 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 RHOBTB1O94844 696 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 LYPLA2O95372 231 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 GUCA1CO95843 209 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 CASP14P31944 242 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 SNRPFP62306 86 aaKnown RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 ZBED5Q49AG3 693 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 Q6ZPB1 254 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 FAM86B1Q8N7N1 296 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 ANKRD7Q92527 254 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 PLIN2Q99541 437 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 TEKT3Q9BXF9 490 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 TSGA10Q9BZW7 698 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 HAUS4Q9H6D7 363 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 SLC38A10Q9HBR0 1119 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 INPP5EQ9NRR6 644 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 CGNQ9P2M7 1197 aaKnown RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 SH3BGRL2Q9UJC5 107 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 F11RQ9Y624 299 aaKnown RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 KIF13BQ9NQT8 1826 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 EP400Q96L91 3159 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 BAZ2AQ9UIF9 1905 aaKnown RBP3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 MYH2Q9UKX2 1941 aa3.97□□□□□ -1.77
HMGB3P14-201ENST00000494195 NFASCO94856 1347 aa3.96□□□□□ -1.77
HMGB3P14-201ENST00000494195 SIPA1L1O43166 1804 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 SLX4Q8IY92 1834 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 CETN3O15182 167 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 CALUO43852 315 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 LCA5LO95447 670 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 GNG11P61952 73 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 CDK16Q00536 496 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 HSP90AA4PQ58FG1 418 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 PARVGQ9HBI0 331 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 UBIAD1Q9Y5Z9 338 aa3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 BZW2Q9Y6E2 419 aaKnown RBP3.96□□□□□ -1.78
HMGB3P14-201ENST00000494195 FLOT1O75955 427 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SMIM10L1P0DMW3 83 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 DBTP11182 482 aaKnown RBP3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 CASQ1P31415 396 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 EPS15P42566 896 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 CCT3P49368 545 aaKnown RBP3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SPIBQ01892 262 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SPA17Q15506 151 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 DGUOKQ16854 277 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 WHAMMP3Q1A5X7 153 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 EXOC3L2Q2M3D2 409 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 LY6G6FQ5SQ64 297 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 PDZK1Q5T2W1 519 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 MNS1Q8NEH6 495 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SCFD1Q8WVM8 642 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 DEDD2Q8WXF8 326 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SMIM10Q96HG1 83 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 ZNF641Q96N77 438 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 NAPGQ99747 312 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SPIN2AQ99865 258 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SPIN2BQ9BPZ2 258 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 ERP44Q9BS26 406 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 SLC40A1Q9NP59 571 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 OPN4Q9UHM6 478 aa3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 PTBP2Q9UKA9 531 aaKnown RBP3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 YTHDF2Q9Y5A9 579 aaKnown RBP3.95□□□□□ -1.78
HMGB3P14-201ENST00000494195 CDK5RAP2Q96SN8 1893 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 KIF26AQ9ULI4 1882 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 ADAMTSL1Q8N6G6 1762 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 PSME4Q14997 1843 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 ARHGEF35A5YM69 484 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 SERPINE3A8MV23 424 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 BTNL10A8MVZ5 291 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 H0YCG3 227 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 ATP8B1O43520 1251 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 UPK3AO75631 287 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 CCDC172P0C7W6 258 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 TCN1P20061 433 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 NPBWR2P48146 333 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 SNAP25P60880 206 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 PSMC5P62195 406 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 TTLL9Q3SXZ7 439 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 CFAP157Q5JU67 520 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 ATAD3BQ5T9A4 648 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 CNIH2Q6PI25 160 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 WDR59Q6PJI9 974 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 Q6ZR03 302 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 ZNF720Q7Z2F6 126 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 CEP112Q8N8E3 955 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 FRZBQ92765 325 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 CCDC42Q96M95 316 aa3.94□□□□□ -1.78
HMGB3P14-201ENST00000494195 RPRD1AQ96P16 312 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms