RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ERCC1P07992 297 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-224ENST00000494132 MAGEB1P43366 347 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 HTR5AP47898 357 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 EVX1P49640 407 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 HMGA2P52926 109 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 KLF3P57682 345 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-224ENST00000494132 PCBD1P61457 104 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 TMEM249Q2WGJ8 235 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 DNAL1Q4LDG9 190 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 TMEM255AQ5JRV8 349 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 CORO6Q6QEF8 472 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 GLB1L2Q8IW92 636 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 OR6V1Q8N148 313 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 OR52L1Q8NGH7 329 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 OR52E2Q8NGJ4 325 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 NEU4Q8WWR8 484 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-224ENST00000494132 BCL2L14Q9BZR8 327 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 TRIM15Q9C019 465 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 OR2J1Q9GZK6 312 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 YAE1D1Q9NRH1 226 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 EIF3KQ9UBQ5 218 aaKnown RBP12.59□□□□□ -0.39
ATG4B-224ENST00000494132 B9D1Q9UPM9 204 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 IGLV3-9A0A075B6K5 115 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 IGHV4-61A0A0C4DH41 118 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 LOC390937A0A1W2PQ73 354 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 OR6C68A6NDL8 312 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 ARPC3O15145 178 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 RER1O15258 196 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 CST1P01037 141 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 RAP2AP10114 183 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 GAAP10253 952 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 APEHP13798 732 aaKnown RBP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF250P15622 560 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 USF1P22415 310 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 NR4A2P43354 598 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 PPP1CBP62140 327 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 PPP2R2BQ00005 443 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 LOXL1Q08397 574 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 SCRN3Q0VDG4 424 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 TRAP1Q12931 704 aaKnown RBP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 AQP6Q13520 282 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 FLOT2Q14254 428 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 PGM2L1Q6PCE3 622 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 VASH1Q7L8A9 365 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 TMEM179BQ7Z7N9 219 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 SPATA24Q86W54 205 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 CYB561A3Q8NBI2 242 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 UBASH3BQ8TF42 649 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 IPCEF1Q8WWN9 437 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-224ENST00000494132 CHID1Q9BWS9 393 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 MS4A5Q9H3V2 200 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 POFUT1Q9H488 388 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 TBC1D23Q9NUY8 699 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 ARMC1Q9NVT9 282 aa12.58□□□□□ -0.4
ATG4B-224ENST00000494132 DYSFO75923 2080 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 DHRS12A0PJE2 317 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 BHLHE40O14503 412 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 CD5LO43866 347 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 DBHP09172 617 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF16P17020 682 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 COL8A2P25067 703 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 CRABP1P29762 137 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 PYCR1P32322 319 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 TRIP10Q15642 601 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 MICAQ29983 383 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 CCDC92Q53HC0 331 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 DNM1P34Q6PK57 102 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 LYPD4Q6UWN0 246 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 RASSF6Q6ZTQ3 369 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 OR10G2Q8NGC3 310 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 OR51L1Q8NGJ5 315 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 OR4Q3Q8NH05 313 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 MARS2Q96GW9 593 aaKnown RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 C4orf45Q96LM5 186 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 NIPSNAP1Q9BPW8 284 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 TSSK6Q9BXA6 273 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 CADM1Q9BY67 442 aaKnown RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 MYOZ1Q9NP98 299 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 FBXO9Q9UK97 447 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 NDRG4Q9ULP0 352 aaKnown RBP12.57□□□□□ -0.4
ATG4B-224ENST00000494132 GRIP1Q9Y3R0 1128 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 LHFPL6Q9Y693 200 aa12.57□□□□□ -0.4
ATG4B-224ENST00000494132 LRP5LA4QPB2 252 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 AQP12BA6NM10 295 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 C17orf100A8MU93 164 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 NDUFS8O00217 210 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 GNGT2O14610 69 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 CDC14BO60729 498 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 ABHD16AO95870 558 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 HLA-DQA2P01906 255 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 TFP02787 698 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 GCH1P30793 250 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms