RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 RGCCQ9H4X1 137 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 NANOGQ9H9S0 305 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 SLCO1B3Q9NPD5 702 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 SLC25A37Q9NYZ2 338 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 ZNF225Q9UK10 706 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 TRAPPC4Q9Y296 219 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 SAR1BQ9Y6B6 198 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 CPS1P31327 1500 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 EHBP1L1Q8N3D4 1523 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 CEMIPQ8WUJ3 1361 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 PZPP20742 1482 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 SHANK2Q9UPX8 1470 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 ERI2A8K979 691 aaKnown RBP4.25□□□□□ -1.73
SMC2-205ENST00000493955 ICOSLGO75144 302 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 FKBP6O75344 327 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 IGHV4-34P06331 123 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 SMIM10L1P0DMW3 83 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 PRKACAP17612 351 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 CNR1P21554 472 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 CLDN18P56856 261 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 PSG7Q13046 419 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 DNAJC3Q13217 504 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 LINC00173Q6ZV60 143 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 TMEM150AQ86TG1 271 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 APRG1Q8IVJ8 170 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 FAM71E2Q8N5Q1 922 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 OR2A1Q8NGT9 310 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 OR6X1Q8NH79 312 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 RDH5Q92781 318 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 ZNF707Q96C28 371 aaPredicted RBP4.25□□□□□ -1.73
SMC2-205ENST00000493955 SMIM10Q96HG1 83 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 DNAJC1Q96KC8 554 aaKnown RBP4.25□□□□□ -1.73
SMC2-205ENST00000493955 OPALINQ96PE5 141 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 NXF3Q9H4D5 531 aaKnown RBP4.25□□□□□ -1.73
SMC2-205ENST00000493955 RHBDD3Q9Y3P4 386 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 CAMSAP2Q08AD1 1489 aa4.25□□□□□ -1.73
SMC2-205ENST00000493955 MROH7-TTC4A0A0A0MT08 1334 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 UGGT1Q9NYU2 1555 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 MYO5BQ9ULV0 1848 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 TDRD6O60522 2096 aaKnown RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 LRRC7Q96NW7 1537 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 A0A1B0GW55 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 H7C0C1 242 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 SRP72O76094 671 aaKnown RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 CD160O95971 181 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 IFNW1P05000 195 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L2P0CJ85 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L3P0CJ86 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L4P0CJ87 422 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L5P0CJ88 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L6P0CJ89 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L7P0CJ90 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CT45A6P0DMU7 189 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CT45A5P0DMU8 189 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CT45A7P0DMV0 189 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 ZNF19P17023 458 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 MSR1P21757 451 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 OR1E1P30953 314 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 GPX4P36969 197 aaPredicted RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 TNFSF9P41273 254 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 NCBP2P52298 156 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMC2-205ENST00000493955 MXD1Q05195 221 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 UNC119Q13432 240 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 PRPSAP1Q14558 356 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 NCF4Q15080 339 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 OR7A5Q15622 319 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 ZNF726P1Q15940 193 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CT45A1Q5HYN5 189 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CCNJQ5T5M9 372 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 ANKRD22Q5VYY1 191 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 SPECC1LQ69YQ0 1117 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4L9Q6RFH8 374 aaPredicted RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 HDDC2Q7Z4H3 204 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 VTCN1Q7Z7D3 282 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 OAFQ86UD1 273 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 MREGQ8N565 214 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 CT45A3Q8NHU0 189 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 FAM3DQ96BQ1 224 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 LRRC58Q96CX6 371 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 TSSK3Q96PN8 268 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 NRTNQ99748 197 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 MRPL37Q9BZE1 423 aaKnown RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 IL22Q9GZX6 179 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 TDRD3Q9H7E2 651 aaKnown RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 BEX1Q9HBH7 125 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 ZNF226Q9NYT6 803 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 STOX2Q9P2F5 926 aaPredicted RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 DUX4Q9UBX2 424 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 ZNF629Q9UEG4 869 aaPredicted RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 PCYOX1Q9UHG3 505 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 F11RQ9Y624 299 aaKnown RBP4.24□□□□□ -1.73
SMC2-205ENST00000493955 CROCC2H7BZ55 1655 aa4.24□□□□□ -1.73
SMC2-205ENST00000493955 KIAA1107Q9UPP5 1409 aa4.23□□□□□ -1.73
SMC2-205ENST00000493955 ABCC3O15438 1527 aa4.23□□□□□ -1.73
SMC2-205ENST00000493955 PIK3C2BO00750 1634 aa4.23□□□□□ -1.73
SMC2-205ENST00000493955 NUPL2O15504 423 aaKnown RBP4.23□□□□□ -1.73
SMC2-205ENST00000493955 OTCP00480 354 aa4.23□□□□□ -1.73
SMC2-205ENST00000493955 CTRB1P17538 263 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms