RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 MRPL22Q9NWU5 206 aaKnown RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 ATMQ13315 3056 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 A0A0A6YYC8 382 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF860A6NHJ4 632 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 I3L1I5 382 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 FFAR3O14843 346 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 GPR42O15529 346 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 WT1P19544 449 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 DRD5P21918 477 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 FBLP22087 321 aaKnown RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 FASP25445 335 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 UCP1P25874 307 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 NUDT2P50583 147 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 TMPRSS3P57727 454 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 RPS15P62841 145 aaKnown RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 SNRPNP63162 240 aaKnown RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 CXADRP78310 365 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 CPSF6Q16630 551 aaKnown RBP eCLIP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 EXOC3L2Q2M3D2 409 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 RFTN2Q52LD8 501 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF678Q5SXM1 525 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 FAM69BQ5VUD6 431 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 NCR3LG1Q68D85 454 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 C19orf48Q6RUI8 117 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF620Q6ZNG0 422 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 KCTD9Q7L273 389 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 PRSS41Q7RTY9 318 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 FAM220AQ7Z4H9 259 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 COMMD2Q86X83 199 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 CCDC71LQ8N9Z2 235 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 CYB561A3Q8NBI2 242 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 ASB5Q8WWX0 329 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 C11orf40Q8WZ69 217 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 BPIFA2Q96DR5 249 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 ARSGQ96EG1 525 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 MMABQ96EY8 250 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 OR5B2Q96R09 309 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 DPH2Q9BQC3 489 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-222ENST00000493919 GINS4Q9BRT9 223 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 SLC38A1Q9H2H9 487 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 AGPAT4Q9NRZ5 378 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 ERVK13-1Q9NX77 482 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 FBXL3Q9UKT7 428 aa10.46□□□□□ -0.74
BRCA1-222ENST00000493919 LRIT2A6NDA9 550 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 C5orf58C9J3I9 102 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF587BE7ETH6 402 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 G3V2L1 256 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 OR7A17O14581 309 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 SUSD5O60279 629 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 SH3BGRLO75368 114 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 HLA-DQB1P01920 261 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 AKR1C3P42330 323 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 FOXL2P58012 376 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 OR2B8PP59922 312 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 PCLAFQ15004 111 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 IMPG1Q17R60 797 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 GRHL2Q6ISB3 625 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 TCF24Q7RTU0 167 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 CUZD1Q86UP6 607 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 FAM71CQ8NEG0 241 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 OR9A4Q8NGU2 314 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 DVL3Q92997 716 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-222ENST00000493919 FAM162AQ96A26 154 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 RCN3Q96D15 328 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 TM4SF19Q96DZ7 209 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 WDR34Q96EX3 536 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 HINT2Q9BX68 163 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ACTRT3Q9BYD9 372 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ISYNA1Q9NPH2 558 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 RNF6Q9Y252 685 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 CCL27Q9Y4X3 112 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 PTPRQQ9UMZ3 2332 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 A0A0G2JN53 185 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 C21orf140B9A014 251 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 B4GALT2O60909 372 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 FZD7O75084 574 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 CH25HO95992 272 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 B3GALT4O96024 378 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 GZMHP20718 246 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 S100A7P31151 101 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 PTGER4P35408 488 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ARL3P36405 182 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 AVPR1BP47901 424 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 UCNP55089 124 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 CLDN18P56856 261 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 RAB8AP61006 207 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 LSM3P62310 102 aaKnown RBP10.45□□□□□ -0.74
BRCA1-222ENST00000493919 DEFB134Q4QY38 66 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 AGKQ53H12 422 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 UNC50Q53HI1 259 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 COX15Q7KZN9 410 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 RBM45Q8IUH3 476 aaKnown RBP10.45□□□□□ -0.74
BRCA1-222ENST00000493919 RNF175Q8N4F7 328 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 CLDN22Q8N7P3 220 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 OR4F6Q8NGB9 312 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ORAOV1Q8WV07 137 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 CCDC107Q8WV48 283 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 TAAR8Q969N4 342 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms