RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 NR4A2P43354 598 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 OR4K13Q8NH42 304 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 TSSK2Q96PF2 358 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 DGCR6LQ9BY27 220 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 SLCO1C1Q9NYB5 712 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 B9D1Q9UPM9 204 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 U3KQV3 271 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 H3BSA7 217 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 BHLHE40O14503 412 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 SGCEO43556 437 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 DNAJC8O75937 253 aaPredicted RBP19.38■□□□□ 0.69
SNIP1-203ENST00000493916 CLPTM1O96005 669 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 GSTM3P21266 225 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 USF1P22415 310 aaPredicted RBP19.38■□□□□ 0.69
SNIP1-203ENST00000493916 GIFP27352 417 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 PPP1R8Q12972 351 aaKnown RBP19.38■□□□□ 0.69
SNIP1-203ENST00000493916 BNIP1Q12981 228 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 CARTPTQ16568 116 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 NKPD1Q17RQ9 610 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 CLEC12AQ5QGZ9 265 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 RFPL4BQ6ZWI9 263 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 VASH1Q7L8A9 365 aaPredicted RBP19.38■□□□□ 0.69
SNIP1-203ENST00000493916 ZBTB46Q86UZ6 589 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 OR6V1Q8N148 313 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 ZNF786Q8N393 782 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 ICA1LQ8NDH6 482 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 ZNF540Q8NDQ6 660 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 UBASH3BQ8TF42 649 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 CANT1Q8WVQ1 401 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 PLA2G12AQ9BZM1 189 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 TAAR3PQ9P1P4 343 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 ASH2LQ9UBL3 628 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 ATPIF1Q9UII2 106 aa19.38■□□□□ 0.69
SNIP1-203ENST00000493916 IGHV3-13P01766 116 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 HTR5AP47898 357 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 FLOT2Q14254 428 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 MOGQ16653 247 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 TMEM249Q2WGJ8 235 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 MBNL2Q5VZF2 373 aaKnown RBP19.37■□□□□ 0.69
SNIP1-203ENST00000493916 ARL9Q6T311 187 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 NPEPL1Q8NDH3 523 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 SDR9C7Q8NEX9 313 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 OR8D4Q8NGM9 314 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 MARS2Q96GW9 593 aaKnown RBP19.37■□□□□ 0.69
SNIP1-203ENST00000493916 C4orf45Q96LM5 186 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 ELOVL3Q9HB03 270 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 RPRD1BQ9NQG5 326 aaKnown RBP19.37■□□□□ 0.69
SNIP1-203ENST00000493916 CSPG4Q6UVK1 2322 aa19.37■□□□□ 0.69
SNIP1-203ENST00000493916 FN1P02751 2386 aaKnown RBP19.36■□□□□ 0.69
SNIP1-203ENST00000493916 OR6C68A6NDL8 312 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 ARRDC5A6NEK1 342 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 OR6C6A6NF89 314 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 TLX2O43763 284 aaPredicted RBP19.36■□□□□ 0.69
SNIP1-203ENST00000493916 CST1P01037 141 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 NAT2P11245 290 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 ARHGDIAP52565 204 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 GLO1Q04760 184 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.36■□□□□ 0.69
SNIP1-203ENST00000493916 ZNF718Q3SXZ3 478 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 CD300LDQ6UXZ3 194 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 SLC26A10Q8NG04 563 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 OR10G2Q8NGC3 310 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 OR52E2Q8NGJ4 325 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 ABHD4Q8TB40 342 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 SNX33Q8WV41 574 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 SRA1Q9HD15 236 aaKnown RBP19.36■□□□□ 0.69
SNIP1-203ENST00000493916 HINT3Q9NQE9 182 aaKnown RBP19.36■□□□□ 0.69
SNIP1-203ENST00000493916 TBC1D23Q9NUY8 699 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 PLEK2Q9NYT0 353 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 POMPQ9Y244 141 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 POLR1DQ9Y2S0 133 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 HIVEP2P31629 2446 aa19.36■□□□□ 0.69
SNIP1-203ENST00000493916 C17orf100A8MU93 164 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 INAFM1C9JVW0 142 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 ABHD16AO95870 558 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 GPANK1O95872 356 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 CENPAP49450 140 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 PPP1CBP62140 327 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 HIST1H3AP68431 136 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 MRPS11P82912 194 aaKnown RBP19.35■□□□□ 0.69
SNIP1-203ENST00000493916 PPP2R2BQ00005 443 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 KRTAP21-3Q3LHN1 58 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 CCDC92Q53HC0 331 aaPredicted RBP19.35■□□□□ 0.69
SNIP1-203ENST00000493916 ELFN2Q5R3F8 820 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 SPATA46Q5T0L3 261 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 SLC35F1Q5T1Q4 408 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 HIST2H3PS2Q5TEC6 136 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 OTPQ5XKR4 325 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 HIST2H3AQ71DI3 136 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 LNX2Q8N448 690 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 SLC25A40Q8TBP6 338 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 BPESC1Q9GZL8 116 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 TBCCD1Q9NVR7 557 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 BAIAP2Q9UQB8 552 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 LHFPL6Q9Y693 200 aa19.35■□□□□ 0.69
SNIP1-203ENST00000493916 TCRBV3S1A0A5B6 114 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 NGFP01138 241 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 TUBG1P23258 451 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 GCH1P30793 250 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 COX10Q12887 443 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms