RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 OR51G2Q8NGK0 314 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 OR6N2Q8NGY6 317 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 OR2T27Q8NH04 317 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 OTOSQ8NHW6 89 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 S100PBPQ96BU1 408 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 LGALS12Q96DT0 336 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 SH3GL3Q99963 347 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 RNF121Q9H920 327 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 ADGRL4Q9HBW9 690 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 EMC7Q9NPA0 242 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 PSORS1C1Q9UIG5 152 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 LAMP5Q9UJQ1 280 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 SLC1A7O00341 560 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 MRPS14O60783 128 aaKnown RBP10.86□□□□□ -0.67
SNX17-208ENST00000493711 SEC14L2O76054 403 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 MPZL1O95297 269 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 SPARCP09486 303 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 COX5BP10606 129 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 CD79AP11912 226 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 CBR1P16152 277 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 RAB1AP62820 205 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 HIST1H3AP68431 136 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 TFF3Q07654 80 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 GTF3C1Q12789 2109 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 PPA1Q15181 289 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 SMN1Q16637 294 aaKnown RBP10.86□□□□□ -0.67
SNX17-208ENST00000493711 HIST2H3PS2Q5TEC6 136 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 DEGS2Q6QHC5 323 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 HIST2H3AQ71DI3 136 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 DPY19L4Q7Z388 723 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 CDC20BQ86Y33 519 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 SLC35F2Q8IXU6 374 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 LRRC18Q8N456 261 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 ACBD7Q8N6N7 88 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 ZNF540Q8NDQ6 660 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 JAM3Q9BX67 310 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 HDHD2Q9H0R4 259 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 FGF20Q9NP95 211 aaPredicted RBP10.86□□□□□ -0.67
SNX17-208ENST00000493711 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
SNX17-208ENST00000493711 B3GNT2Q9NY97 397 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 ASH2LQ9UBL3 628 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 AASSQ9UDR5 926 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 DIMT1Q9UNQ2 313 aaKnown RBP10.86□□□□□ -0.67
SNX17-208ENST00000493711 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 LHFPL6Q9Y693 200 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 MPDZO75970 2070 aa10.86□□□□□ -0.67
SNX17-208ENST00000493711 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 SGCEO43556 437 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 SELENOFO60613 162 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 ZNF254O75437 659 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 GPANK1O95872 356 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 HLA-HP01893 362 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 APOC1P02654 83 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 SCG5P05408 212 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 LYNP07948 512 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 MMP7P09237 267 aaPredicted RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 MYL12AP19105 171 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 ALOX5APP20292 161 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 CRHBPP24387 322 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 NAA10P41227 235 aaPredicted RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 GABARAPL2P60520 117 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 EIF2B1Q14232 305 aaKnown RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 RAB35Q15286 201 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 MEP1BQ16820 701 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 LAIR2Q6ISS4 152 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 UGT2A3Q6UWM9 527 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 B3GLCTQ6Y288 498 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 KCTD20Q7Z5Y7 419 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 STX19Q8N4C7 294 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 WDR31Q8NA23 367 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 IL17RDQ8NFM7 739 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 OR1J2Q8NGS2 313 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 HAVCR2Q8TDQ0 301 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 GGHQ92820 318 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 FBXO17Q96EF6 278 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 TMEM80Q96HE8 168 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 DACH2Q96NX9 599 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 NR1H4Q96RI1 486 aaPredicted RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 COPS4Q9BT78 406 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 MED18Q9BUE0 208 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 NIPAL2Q9H841 368 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 AMBNQ9NP70 447 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 UBAP1Q9NZ09 502 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 GDF2Q9UK05 429 aaPredicted RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 MYRFQ9Y2G1 1151 aa10.85□□□□□ -0.67
SNX17-208ENST00000493711 EXOSC1Q9Y3B2 195 aaKnown RBP10.85□□□□□ -0.67
SNX17-208ENST00000493711 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 DAPL1A0PJW8 107 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 TUBAL3A6NHL2 446 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 J3QRE1 110 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 CASKO14936 926 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 XPNPEP2O43895 674 aa10.84□□□□□ -0.67
SNX17-208ENST00000493711 GOSR1O95249 250 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms