RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TMEM239Q8WW34 195 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 UPRTQ96BW1 309 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 ALG12Q9BV10 488 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 KAT8Q9H7Z6 458 aaKnown RBP18■□□□□ 0.47
PFDN4-205ENST00000493356 MAN2C1Q9NTJ4 1040 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 IL19Q9UHD0 177 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 IL20RAQ9UHF4 553 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 DOCK11Q5JSL3 2073 aa18■□□□□ 0.47
PFDN4-205ENST00000493356 CMYA5Q8N3K9 4069 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 MDFIC2A0A1B0GVS7 189 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 WNT2P09544 360 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 KITLGP21583 273 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 SRSF4Q08170 494 aaKnown RBP17.99■□□□□ 0.47
PFDN4-205ENST00000493356 ENDOGQ14249 297 aaKnown RBP17.99■□□□□ 0.47
PFDN4-205ENST00000493356 INTS11Q5TA45 600 aaKnown RBP17.99■□□□□ 0.47
PFDN4-205ENST00000493356 MUC20Q8N307 709 aaPredicted RBP17.99■□□□□ 0.47
PFDN4-205ENST00000493356 DPP10Q8N608 796 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 NPEPL1Q8NDH3 523 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 RASSF5Q8WWW0 418 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 TLCD1Q96CP7 247 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 RBP7Q96R05 134 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 SSBP3Q9BWW4 388 aaPredicted RBP17.99■□□□□ 0.47
PFDN4-205ENST00000493356 TBCCD1Q9NVR7 557 aa17.99■□□□□ 0.47
PFDN4-205ENST00000493356 NDRG4Q9ULP0 352 aaKnown RBP17.99■□□□□ 0.47
PFDN4-205ENST00000493356 TRAV40A0A0B4J280 105 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 TMEM178BH3BS89 294 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 SURF4O15260 269 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 GUCA1AP43080 201 aaPredicted RBP17.98■□□□□ 0.47
PFDN4-205ENST00000493356 TAS2R41P59536 307 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 ALG10Q5BKT4 473 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 BTNL3Q6UXE8 466 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 LRRN1Q6UXK5 716 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 FNDC8Q8TC99 324 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 WFDC12Q8WWY7 111 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 OR2V2Q96R30 315 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 PDP1Q9P0J1 537 aaPredicted RBP17.98■□□□□ 0.47
PFDN4-205ENST00000493356 RIMS3Q9UJD0 308 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 HIF3AQ9Y2N7 669 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 SH3GLB1Q9Y371 365 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 NDUFAF1Q9Y375 327 aa17.98■□□□□ 0.47
PFDN4-205ENST00000493356 IGHV2-70DA0A0C4DH43 119 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 A0A1W2PPL8 197 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 HOXA3O43365 443 aaPredicted RBP17.97■□□□□ 0.47
PFDN4-205ENST00000493356 OR5F1O95221 314 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 KNG1P01042 644 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 TNFRSF1BP20333 461 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 MSR1P21757 451 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 TUBG1P23258 451 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 MMP16P51512 607 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 RPL27P61353 136 aaKnown RBP17.97■□□□□ 0.47
PFDN4-205ENST00000493356 PIN1Q13526 163 aaPredicted RBP17.97■□□□□ 0.47
PFDN4-205ENST00000493356 CCDC80Q76M96 950 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 SYT9Q86SS6 491 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 OR10A6Q8NH74 314 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 DACT3Q96B18 629 aaPredicted RBP17.97■□□□□ 0.47
PFDN4-205ENST00000493356 CMBLQ96DG6 245 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 THOC1Q96FV9 657 aaKnown RBP17.97■□□□□ 0.47
PFDN4-205ENST00000493356 GCM1Q9NP62 436 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 TUBG2Q9NRH3 451 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 MED31Q9Y3C7 131 aa17.97■□□□□ 0.47
PFDN4-205ENST00000493356 A0A1B0GUS0 222 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 FAM181BA6NEQ2 426 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 C12orf71A8MTZ7 269 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 SHOX2O60902 331 aaPredicted RBP17.96■□□□□ 0.47
PFDN4-205ENST00000493356 COX5BP10606 129 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 RPS2P15880 293 aaKnown RBP17.96■□□□□ 0.47
PFDN4-205ENST00000493356 CPT2P23786 658 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 VMACQ2NL98 169 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 POU5F2Q8N7G0 328 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 RAB40AQ8WXH6 277 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 HAVCR1Q96D42 359 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 POLR2J2Q9GZM3 115 aaKnown RBP17.96■□□□□ 0.47
PFDN4-205ENST00000493356 POLR2J3Q9H1A7 115 aaKnown RBP17.96■□□□□ 0.47
PFDN4-205ENST00000493356 RABEP2Q9H5N1 569 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 STARD10Q9Y365 291 aa17.96■□□□□ 0.47
PFDN4-205ENST00000493356 ANGPT2O15123 496 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 PIP5K1CO60331 668 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 SCG5P05408 212 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 ERFP50548 548 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 GZMMP51124 257 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 GNB2P62879 340 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 DEFB112Q30KQ8 113 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 C17orf107Q6ZR85 190 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 KLBQ86Z14 1044 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 KIR3DL3Q8N743 410 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 PRDM13Q9H4Q3 707 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 BEX1Q9HBH7 125 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 TMEM165Q9HC07 324 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 POLE4Q9NR33 117 aa17.95■□□□□ 0.46
PFDN4-205ENST00000493356 IFNL4K9M1U5 179 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 ZNF205O95201 554 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 HTR5AP47898 357 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 RAG2P55895 527 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 CTXN1P60606 82 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 NFYCQ13952 458 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 ZNF362Q5T0B9 420 aaPredicted RBP17.94■□□□□ 0.46
PFDN4-205ENST00000493356 FAM205BPQ63HN1 556 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 BRD3OSQ6XYD6 125 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 IGFN1Q86VF2 1251 aa17.94■□□□□ 0.46
PFDN4-205ENST00000493356 OR10S1Q8NGN2 331 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms