RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 COX4I2Q96KJ9 171 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 SDHCQ99643 169 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ULBP2Q9BZM5 246 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC6A15Q9H2J7 730 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF552Q9H707 407 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 B3GAT2Q9NPZ5 323 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 CENPMQ9NSP4 180 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ABRACLQ9P1F3 81 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FBXL3Q9UKT7 428 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FLVCR1Q9Y5Y0 555 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 LHFPL6Q9Y693 200 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ARHGAP21Q5T5U3 1957 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF716A6NP11 495 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 DHHO43323 396 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 TMEM127O75204 238 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SYNGR4O95473 234 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 RAF1P04049 648 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 CELA3AP09093 270 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC2A2P11168 524 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 EPXP11678 715 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ATF1P18846 271 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 WT1P19544 449 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SRMP19623 302 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 MSR1P21757 451 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ACHEP22303 614 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 PTBP1P26599 531 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■■■ 29.7
SMARCC1-208ENST00000492896 CDAP32320 146 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 DCTDP32321 178 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 GUCA1AP43080 201 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SELENOPP49908 381 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 CLDN15P56746 228 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 PSMA6P60900 246 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 LSM6P62312 80 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 PPIAP62937 165 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 OXA1LQ15070 435 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ODF4Q2M2E3 257 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC25A35Q3KQZ1 300 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 CEP78Q5JTW2 689 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 PHYHD1Q5SRE7 291 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 BCL2L15Q5TBC7 163 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 XKRXQ6PP77 449 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF704Q6ZNC4 412 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 CFAP77Q6ZQR2 320 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 FCRLAQ7L513 359 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 AAED1Q7RTV5 226 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC22A16Q86VW1 577 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 LRRC28Q86X40 367 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 OR8H2Q8N162 312 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 FAM109AQ8N4B1 249 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 GDPD1Q8N9F7 314 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ZIC4Q8N9L1 334 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 POC5Q8NA72 575 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ZFP62Q8NB50 900 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 OR10AC1Q8NH08 325 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ROBO4Q8WZ75 1007 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF845Q96IR2 970 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 NIPAL2Q9H841 368 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 MOB1AQ9H8S9 216 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 TCF7L1Q9HCS4 588 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 EXTL2Q9UBQ6 330 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 OR52A1Q9UKL2 312 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 CDV3Q9UKY7 258 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 DHDHQ9UQ10 334 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC22A13Q9Y226 551 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 AK6Q9Y3D8 172 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-208ENST00000492896 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 WDFY3Q8IZQ1 3526 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 DNAJC13O75165 2243 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 TMEM269A0A1B0GVZ9 245 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 AIPO00170 330 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 PTTG1O95997 202 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 ACTL6AO96019 429 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 CD2P06729 351 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF708P17019 499 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 HSD11B1P28845 292 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 TALDO1P37837 337 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 MAGEB1P43366 347 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 EVX1P49640 407 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 TNFSF10P50591 281 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 MMP16P51512 607 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 CCL11P51671 97 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 CLDN18P56856 261 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 TAF13Q15543 124 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 BCL2A1Q16548 175 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 SGCAQ16586 387 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 PYDC2Q56P42 97 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 TMEM244Q5VVB8 128 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 STAC2Q6ZMT1 411 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 RDH10Q8IZV5 341 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 SAMD12Q8N8I0 201 aa8.09□□□□□ -1.11
SMARCC1-208ENST00000492896 FDCSPQ8NFU4 85 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms