RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MDH1P40925 334 aaKnown RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 GSK3BP49841 420 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 SLC7A2P52569 658 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 CDK5R2Q13319 367 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 AQP6Q13520 282 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 FHL1Q13642 323 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 DGCR6Q14129 220 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 ENDOGQ14249 297 aaKnown RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 KRT72Q14CN4 511 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 SPATA46Q5T0L3 261 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 AVPI1Q5T686 147 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 DCAF12L2Q5VW00 463 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 ZNF774Q6NX45 483 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 C8orf82Q6P1X6 216 aaPredicted RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PGM2L1Q6PCE3 622 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 ADCK1Q86TW2 530 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 MEX3DQ86XN8 651 aaKnown RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 GLB1L2Q8IW92 636 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 OR5L1Q8NGL2 311 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 OR13C2Q8NGS9 318 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PTP4A1Q93096 173 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 HSH2DQ96JZ2 352 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 ZNF570Q96NI8 536 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 DCLRE1CQ96SD1 692 aaKnown RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 GAL3ST1Q99999 423 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 KCTD14Q9BQ13 255 aaPredicted RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 G6PC2Q9NQR9 355 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PCDHB10Q9UN67 800 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 SAMD4AQ9UPU9 718 aaKnown RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PPIAL4CA0A0B4J2A2 164 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 TEX13CA0A0J9YWL9 993 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 TRIM77I1YAP6 450 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 NME4O00746 187 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SGCEO43556 437 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PTP4A3O75365 173 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 DEAF1O75398 565 aaPredicted RBP10.57□□□□□ -0.72
COL6A1-205ENST00000492851 KHDRBS3O75525 346 aaKnown RBP10.57□□□□□ -0.72
COL6A1-205ENST00000492851 FOXH1O75593 365 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PRSS23O95084 383 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 NGFP01138 241 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SDHAP31040 664 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 MPV17P39210 176 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 GPR4P46093 362 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 RGS6P49758 472 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 RPS6KA3P51812 740 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SMIM11AP58511 58 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 TNFAIP6P98066 277 aaPredicted RBP10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SRSF2Q01130 221 aaKnown RBP10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PSG7Q13046 419 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SLC27A4Q6P1M0 643 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 DNM1P34Q6PK57 102 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 TBPL2Q6SJ96 375 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 C12orf54Q6X4T0 127 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 DPY19L2P2Q6ZN68 376 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 RFPL4BQ6ZWI9 263 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 CLDN22Q8N7P3 220 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SLC7A13Q8TCU3 470 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 SAMD8Q96LT4 415 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 Q96M85 177 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 GPX7Q96SL4 187 aaPredicted RBP10.57□□□□□ -0.72
COL6A1-205ENST00000492851 NRIP3Q9NQ35 241 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 PLEK2Q9NYT0 353 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 ATPIF1Q9UII2 106 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 AURKCQ9UQB9 309 aa10.57□□□□□ -0.72
COL6A1-205ENST00000492851 ISPDA4D126 451 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 ZSCAN5BA6NJL1 495 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 IFNL4K9M1U5 179 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 CDC42EP2O14613 210 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 DOK2O60496 412 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 SLC16A7O60669 478 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 KITLGP21583 273 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 FPR2P25090 351 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 CRABP1P29762 137 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 HTR5AP47898 357 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 LIMS1P48059 325 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 NUDT2P50583 147 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 GLYATQ6IB77 296 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 FAM122BQ7Z309 247 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 C1QL2Q7Z5L3 287 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 KLHL36Q8N4N3 616 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 SPICQ8N5J4 248 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 GJC3Q8NFK1 279 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 HAVCR1Q96D42 359 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 RBM4Q9BWF3 364 aaKnown RBP10.56□□□□□ -0.72
COL6A1-205ENST00000492851 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 C7orf69Q9H7B7 122 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 SPAG4Q9NPE6 437 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 VSX1Q9NZR4 365 aaPredicted RBP10.56□□□□□ -0.72
COL6A1-205ENST00000492851 ABCD2Q9UBJ2 740 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 IL19Q9UHD0 177 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 SIGLEC7Q9Y286 467 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 ADAM18Q9Y3Q7 739 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 NPTNQ9Y639 398 aa10.56□□□□□ -0.72
COL6A1-205ENST00000492851 OR6C6A6NF89 314 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms