RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 RAG2P55895 527 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 TAS2R43P59537 309 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 PITPNAQ00169 270 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 RIPPLY2Q5TAB7 128 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 PLBD1Q6P4A8 553 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 SLC38A6Q8IZM9 456 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 OR52L1Q8NGH7 329 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 OR5W2Q8NH69 310 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 TRMT10AQ8TBZ6 339 aaKnown RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 SMPDL3BQ92485 455 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CNOT9Q92600 299 aaKnown RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 ZBTB8AQ96BR9 441 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 SLC41A3Q96GZ6 507 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF845Q96IR2 970 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 MCHR1Q99705 422 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 MTHFD2LQ9H903 347 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CALHM2Q9HA72 323 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 COQ3Q9NZJ6 369 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CLCF1Q9UBD9 225 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 IL20RAQ9UHF4 553 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CHST2Q9Y4C5 530 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 MBD3L4A6NDZ8 208 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 MBD3L3A6NE82 208 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 MBD3L5A6NJ08 208 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 DVL2O14641 736 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 PLPP2O43688 288 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SLC2A10O95528 541 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 NTN1O95631 604 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 TGM6O95932 706 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 MT-ND5P03915 603 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF17P17021 662 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CHRNB4P30926 498 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 TIMP3P35625 211 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF136P52737 540 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 GALEQ14376 348 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SP5Q6BEB4 398 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF787Q6DD87 383 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 NIPAL3Q6P499 406 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ARL9Q6T311 187 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 LYPD4Q6UWN0 246 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 MEPCEQ7L2J0 689 aaKnown RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CDH24Q86UP0 819 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 MBD3L2Q8NHZ7 208 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CA5BP1Q8WTZ4 195 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 UCN2Q96RP3 112 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ABHD1Q96SE0 405 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 C7orf50Q9BRJ6 194 aaKnown RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ACTR6Q9GZN1 396 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 TMEM185BQ9H7F4 350 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SPTBN1Q01082 2364 aaKnown RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SLC22A31A6NKX4 558 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 FAM90A27PA6NNH2 459 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 I3L521 148 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 UBL3O95164 117 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CAPZA2P47755 286 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SRP9P49458 86 aaKnown RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 MMP15P51511 669 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CCR4P51679 360 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SUMO3P55854 103 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 TFF3Q07654 80 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 FOXF2Q12947 444 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CDONQ4KMG0 1287 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 GDF7Q7Z4P5 450 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 TMEM255BQ8WV15 326 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 RADILQ96JH8 1075 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 ADGRG7Q96K78 797 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SAMD8Q96LT4 415 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SORCS2Q96PQ0 1159 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 CACNG6Q9BXT2 260 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 DNAJB12Q9NXW2 375 aaKnown RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SLCO1C1Q9NYB5 712 aa8.36□□□□□ -1.07
BRCA1-219ENST00000491747 KLF2Q9Y5W3 355 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 SIRT4Q9Y6E7 314 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
BRCA1-219ENST00000491747 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 A0A0J9YW62 118 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-219ENST00000491747 CXCL3P19876 107 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 GIFP27352 417 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 OR10A3P58181 314 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 RAB14P61106 215 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 RAC1P63000 192 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 CBFBQ13951 182 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 GRK1Q15835 563 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 SLC36A2Q495M3 483 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 SLC25A53Q5H9E4 307 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 CLLU1Q5K131 121 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 MRPL2Q5T653 305 aaKnown RBP8.35□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF836Q6ZNA1 936 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 CEACAM19Q7Z692 300 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 DTX3Q8N9I9 347 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-219ENST00000491747 OR10H4Q8NGA5 316 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 OR11H4Q8NGC9 324 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 ASB5Q8WWX0 329 aa8.35□□□□□ -1.07
BRCA1-219ENST00000491747 OIT3Q8WWZ8 545 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms