RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 MEDAGQ5VYS4 303 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 DCXRQ7Z4W1 244 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 THAP5Q7Z6K1 395 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 CCDC36Q8IYA8 594 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 RFLNBQ8N5W9 214 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 CPEB3Q8NE35 698 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 OR4F15Q8NGB8 312 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 OR10S1Q8NGN2 331 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 OR2AJ1Q8NGZ0 328 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 SLC7A6Q92536 515 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 PIK3IP1Q96FE7 263 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 MAP6Q96JE9 813 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 CNN2Q99439 309 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 TBX5Q99593 518 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 ANKRD60Q9BZ19 345 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 RASSF4Q9H2L5 321 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 WARS2Q9UGM6 360 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 RAB26Q9ULW5 256 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 COPS3Q9UNS2 423 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 DOPEY1Q5JWR5 2465 aa9.36□□□□□ -0.91
CACNA1C-227ENST00000491104 USP9XQ93008 2570 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 DPRXA6NFQ7 191 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 DEFB108AA8MXU0 73 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 PRR32B1ATL7 298 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 CASKO14936 926 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 SGCEO43556 437 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 XPNPEP2O43895 674 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 SBK2P0C263 348 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 COX6B1P14854 86 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 ZNF14P17017 642 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 LOXP28300 417 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 CALCRP30988 508 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 ARR3P36575 388 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 PEX19P40855 299 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 BLVRAP53004 296 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 HIST1H3AP68431 136 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 HIST2H3PS2Q5TEC6 136 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 HIST2H3AQ71DI3 136 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 SLC16A9Q7RTY1 509 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 DPPA2Q7Z7J5 298 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 SLC35F2Q8IXU6 374 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 FAM222BQ8WU58 562 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 FBLIM1Q8WUP2 373 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 LGALS12Q96DT0 336 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 PLPPR2Q96GM1 343 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 SPOCK3Q9BQ16 436 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 USB1Q9BQ65 265 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 PNRC2Q9NPJ4 139 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 PLEK2Q9NYT0 353 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 CRNNQ9UBG3 495 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 TIMM10BQ9Y5J6 103 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 HSPE1-MOB4S4R3N1 261 aa9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 HEATR1Q9H583 2144 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-227ENST00000491104 IQCMA0A1B0GVH7 501 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 PSMD9O00233 223 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 MAGEB4O15481 346 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 SYNGR3O43761 229 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 FAM20BO75063 409 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 PLAUP00749 431 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 IGLV1-44P01699 117 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 ADRA2AP08913 450 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 DBHP09172 617 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 CCNOP22674 350 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 CD40P25942 277 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 ATP6V1E1P36543 226 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 HTR5AP47898 357 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 MTNR1AP48039 350 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 PCBD1P61457 104 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 PLP2Q04941 152 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 RAB35Q15286 201 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 PCK2Q16822 640 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 TEX30Q5JUR7 227 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 ELFN2Q5R3F8 820 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 SSX6Q7RTT6 188 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 PAQR4Q8N4S7 273 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 GJC3Q8NFK1 279 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 BPIFB6Q8NFQ5 453 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 OR10H4Q8NGA5 316 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 OTOSQ8NHW6 89 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 ST7LQ8TDW4 575 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 THEM6Q8WUY1 208 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 RFKQ969G6 155 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 SLAMF6Q96DU3 332 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 Q96MT0 163 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 ABHD6Q9BV23 337 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 OR51B6Q9H340 312 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 HAO2Q9NYQ3 351 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 UBAP1Q9NZ09 502 aa9.34□□□□□ -0.91
CACNA1C-227ENST00000491104 LOC100509620A0A075B734 347 aa9.33□□□□□ -0.92
CACNA1C-227ENST00000491104 IGHV2OR16-5A0A0B4J2B6 119 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms