RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ULK3Q6PHR2 472 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 COMTD1Q86VU5 262 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 TESCQ96BS2 214 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 TMEM19Q96HH6 336 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 CLPTM1LQ96KA5 538 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 PANX1Q96RD7 426 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 OR2H1Q9GZK4 316 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 ERVK-18Q9QC07 812 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 BTNL2Q9UIR0 455 aa11.2□□□□□ -0.62
EXOSC3-207ENST00000490516 DNAH7Q8WXX0 4024 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 F5H5P2 479 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 RNF13O43567 381 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 SLC2A10O95528 541 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 ABHD16AO95870 558 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 IGHG1P01857 330 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 MVDP53602 400 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 DLX1P56177 255 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 MRPS34P82930 218 aaKnown RBP11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 NUDCD3Q8IVD9 361 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 HOMEZQ8IX15 550 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 TRIML2Q8N7C3 387 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 PAPD5Q8NDF8 572 aaKnown RBP11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 NOXO1Q8NFA2 376 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 HAVCR1Q96D42 359 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 FMO2Q99518 471 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 CACYBPQ9HB71 228 aaKnown RBP11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 PSMC3IPQ9P2W1 217 aaPredicted RBP11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 DNAJB11Q9UBS4 358 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 RPUSD1Q9UJJ7 312 aaKnown RBP11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 STARD10Q9Y365 291 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 IFT52Q9Y366 437 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 UGT2A1Q9Y4X1 527 aa11.19□□□□□ -0.62
EXOSC3-207ENST00000490516 A0A0G2JPF8 293 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 HNRNPCL2B2RXH8 293 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 HNRNPCL3B7ZW38 293 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 OR10H3O60404 316 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 HNRNPCL1O60812 293 aaKnown RBP11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 FCN3O75636 299 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 PAHP00439 452 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 HNRNPCL4P0DMR1 293 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 S100A3P33764 101 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 CCT5P48643 541 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 SRP9P49458 86 aaKnown RBP11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 SLC35A2P78381 396 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 HABP2Q14520 560 aaPredicted RBP11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 C8orf74Q6P047 294 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 ARL9Q6T311 187 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 PNKDQ8N490 385 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 NPEPL1Q8NDH3 523 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 NPRL2Q8WTW4 380 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 IFT81Q8WYA0 676 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 SLC35B4Q969S0 331 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 PPP1R36Q96LQ0 422 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 MRPL13Q9BYD1 178 aaKnown RBP11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 TSPYL1Q9H0U9 437 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 RANBP3Q9H6Z4 567 aaPredicted RBP11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 MEAF6Q9HAF1 191 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 SLC17A7Q9P2U7 560 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 MAB21L2Q9Y586 359 aa11.18□□□□□ -0.62
EXOSC3-207ENST00000490516 IGKV1D-43A0A0B4J1Z2 117 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 ELOVL7A1L3X0 281 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 MEGF11A6BM72 1044 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 NPFFO15130 113 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 MLNRO43193 412 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 MT-ATP6P00846 226 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 ABHD2P08910 425 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 ECHS1P30084 290 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 ALDH3A1P30838 453 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 GUCY1A3Q02108 690 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 KLRD1Q13241 179 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 CDONQ4KMG0 1287 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 C10orf128Q5T292 105 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 BTN2A1Q7KYR7 527 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 RCC1LQ96I51 464 aaKnown RBP11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 MAP6Q96JE9 813 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 SIRT7Q9NRC8 400 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 TBCCD1Q9NVR7 557 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 SELENONQ9NZV5 590 aa11.17□□□□□ -0.62
EXOSC3-207ENST00000490516 A0A0B4J2E0 115 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 A0A1B0GVI7 797 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 A0A1B0GX12 115 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 E9PBE3 544 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 ADAM20O43506 726 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 TRMUO75648 421 aaKnown RBP11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 KRT75O95678 551 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 CH25HO95992 272 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 IRF2P14316 349 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 SAA4P35542 130 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 ZNF133P52736 654 aaPredicted RBP11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 DSTNP60981 165 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 FMODQ06828 376 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 OR1Q1Q15612 314 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 SFRP4Q6FHJ7 346 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms