RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GNPDA1P46926 289 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 RAB13P51153 203 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 KPNA2P52292 529 aaKnown RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 SLC7A2P52569 658 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 DPTQ07507 201 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 FHL1Q13642 323 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 KCNJ11Q14654 390 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 LTB4RQ15722 352 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 KNOP1Q1ED39 458 aaKnown RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 TECRLQ5HYJ1 363 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 FRRS1Q6ZNA5 592 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 USP50Q70EL3 339 aaPredicted RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 ABHD12BQ7Z5M8 362 aaPredicted RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 BPIFB2Q8N4F0 458 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 FAM86B1Q8N7N1 296 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 OR52N1Q8NH53 320 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 RHOXF1Q8NHV9 184 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 BLOC1S5Q8TDH9 187 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 PHF10Q8WUB8 498 aaKnown RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 TAF15Q92804 592 aaKnown RBP eCLIP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 RAD51AP1Q96B01 352 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 ST6GAL2Q96JF0 529 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 HSFY1Q96LI6 401 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 SERPINB11Q96P15 392 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 CSPG4P5Q96PW8 444 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 MND1Q9BWT6 205 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 BBS2Q9BXC9 721 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 CCDC90BQ9GZT6 254 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 DSN1Q9H410 356 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 BIN3Q9NQY0 253 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 SEC14L3Q9UDX4 400 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 NRCAMQ92823 1304 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 LTBP2Q14767 1821 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 B4DXG7 233 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 G3V2L1 256 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 K7ESM1 405 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PLPP3O14495 311 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SLC22A5O76082 557 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CT45A6P0DMU7 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CT45A5P0DMU8 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CT45A7P0DMV0 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 UCHL3P15374 230 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SPNP16150 400 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 S100PP25815 95 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 IVDP26440 423 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ADORA1P30542 326 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 MARCKSL1P49006 195 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SSR4P51571 173 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 EFNA3P52797 238 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 C1QTNF8P60827 252 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 RGS1Q08116 209 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CAPRIN1Q14444 709 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 MOGAT2Q3SYC2 334 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CT45A1Q5HYN5 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 KLF17Q5JT82 389 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PDZK1Q5T2W1 519 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 FKBP1CQ5VVH2 108 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TMEM236Q5W0B7 351 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 C5orf46Q6UWT4 87 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 KLHDC1Q8N7A1 406 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 DNAAF3Q8N9W5 541 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 DMBX1Q8NFW5 382 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 OR52E5Q8NH55 327 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CT45A3Q8NHU0 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SLC7A6Q92536 515 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SMARCD2Q92925 531 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 LRRC58Q96CX6 371 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PDXPQ96GD0 296 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ELMO2Q96JJ3 720 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 MARK4Q96L34 752 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 JSRP1Q96MG2 331 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PDCD10Q9BUL8 212 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TRIM62Q9BVG3 475 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 BCL2L14Q9BZR8 327 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 COA1Q9GZY4 146 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 DEFB129Q9H1M3 183 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 WDR41Q9HAD4 459 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 COPZ2Q9P299 210 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TRMT112Q9UI30 125 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TRBV7-9A0A0J9YWB2 115 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 KRTAP9-7A8MTY7 169 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF705EA8MWA4 302 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 LOC110117498-PIK3R3F6TDL0 507 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 GPAA1O43292 621 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TPST2O60704 377 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 UGT2B11O75310 529 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 NDUFB8O95169 186 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 OAZ2O95190 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 DHFRP00374 187 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 IFNA7P01567 189 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 HOXD4P09016 255 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SNRPCP09234 159 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 RBP1P09455 135 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ADORA3P0DMS8 318 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 FCGR1AP12314 374 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 DPEP1P16444 411 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 COX5AP20674 150 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 OGNP20774 298 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 IDSP22304 550 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms