RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 C20orf24Q9BUV8 137 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 BOCQ9BWV1 1114 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SCRT1Q9BWW7 348 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR62Q9BZJ7 368 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 NMES1Q9C002 83 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC35B3Q9H1N7 401 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2AG1Q9H205 316 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CXorf36Q9H7Y0 433 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 NOX4Q9NPH5 578 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 KCNJ16Q9NPI9 418 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 HAO2Q9NYQ3 351 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CNIH4Q9P003 139 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TRPC4Q9UBN4 977 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC23A2Q9UGH3 650 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF107Q9UII5 783 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FBXL7Q9UJT9 491 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 AMDHD2Q9Y303 409 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 COL4A5P29400 1685 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TRPM7Q96QT4 1865 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MKI67P46013 3256 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SCN8AQ9UQD0 1980 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TRBV2A0A0J9YWF9 115 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A1W2PN81 502 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM171A2A8MVW0 826 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FOXE1O00358 373 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 AQP7O14520 342 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CCSO14618 274 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 KDELR3O43731 214 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SOX15O60248 233 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TSPAN2O60636 221 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 IL18BPO95998 194 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RPN2P04844 631 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 APODP05090 189 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 THEGLP0DJG4 465 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TBPP20226 339 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FCARP24071 287 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CHRNA7P36544 502 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CX3CR1P49238 355 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GATMP50440 423 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TAS2R41P59536 307 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF280AP59817 542 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ACTBP60709 375 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RPS15P62841 145 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ACTG1P63261 375 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CDC42EP1Q00587 391 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MC1RQ01726 317 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TRA2AQ13595 282 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC9A5Q14940 896 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 KCNMB1Q16558 191 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CHRFAM7AQ494W8 412 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PDZD11Q5EBL8 140 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ABLIM2Q6H8Q1 611 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ARHGAP11AQ6P4F7 1023 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SHISA2Q6UWI4 295 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DLK2Q6UY11 383 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 THOC6Q86W42 341 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GKN2Q86XP6 184 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TRAPPC5Q8IUR0 188 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 NAXEQ8NCW5 288 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 C1orf162Q8NEQ5 155 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR52N4Q8NGI2 321 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CD300LFQ8TDQ1 290 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GPX8Q8TED1 209 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DNAJB3Q8WWF6 145 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RGP1Q92546 391 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RAB8BQ92930 207 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TAAR8Q969N4 342 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 IGSF8Q969P0 613 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 NEIL2Q969S2 332 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DTD2Q96FN9 168 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 AQP10Q96PS8 301 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR14A2Q96R54 314 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MYADMQ96S97 322 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM39BQ9GZU3 492 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RNF208Q9H0X6 261 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MAGEH1Q9H213 219 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLCO5A1Q9H2Y9 848 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ASB8Q9H765 288 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TAF9BQ9HBM6 251 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 BCL2L10Q9HD36 194 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CLEC1BQ9P126 229 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 LRFN1Q9P244 771 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MYOTQ9UBF9 498 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CACNG4Q9UBN1 327 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 STEAP1Q9UHE8 339 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR52A1Q9UKL2 312 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FARSAQ9Y285 508 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PRG3Q9Y2Y8 225 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DOCK4Q8N1I0 1966 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TCRBV21S2A2A0A5A6 115 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZC3H12DA2A288 527 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 C5orf51A6NDU8 294 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM235A6NFC5 223 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF705GA8MUZ8 300 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 B4E171 279 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 EEF1E1-BLOC1S5C9J1V9 151 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 K7EP13 123 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PRICKLE3O43900 615 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms