RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 RTTNQ86VV8 2226 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 J3QRE1 110 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 RGS10O43665 173 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 HLA-HP01893 362 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 HRGP04196 525 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 CDK1P06493 297 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 HTR1AP08908 422 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 SPARCP09486 303 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 PATE4P0C8F1 98 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 PSKH1P11801 424 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 CD79AP11912 226 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 RPL5P46777 297 aaKnown RBP12.45□□□□□ -0.42
CLDN11-209ENST00000489485 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 TAB1Q15750 504 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 TIMM23BQ5SRD1 257 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 MUCL1Q96DR8 90 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 MARCH7Q9H992 704 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 SLC17A5Q9NRA2 495 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 NDRG3Q9UGV2 375 aa12.45□□□□□ -0.42
CLDN11-209ENST00000489485 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 IRGMA1A4Y4 181 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 A1L4Q6 167 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 TUBAL3A6NHL2 446 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 C12orf71A8MTZ7 269 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 C19orf84I3L1E1 186 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 RAB36O95755 333 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 DCKP27707 260 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ENTPD1P49961 510 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 SORDQ00796 357 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 SLC36A2Q495M3 483 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 CORO6Q6QEF8 472 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 C22orf34Q6ZV56 151 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 SLC16A9Q7RTY1 509 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 LHFPL3Q86UP9 236 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 P2RY8Q86VZ1 359 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 LINC00346Q8IVM7 164 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 SLC35F2Q8IXU6 374 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 TSPAN14Q8NG11 270 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 WFIKKN1Q96NZ8 548 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 TTTY10Q9BZA0 68 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 RNF121Q9H920 327 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 FGF20Q9NP95 211 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 CCNB1IP1Q9NPC3 277 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 KCNG2Q9UJ96 466 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 DIMT1Q9UNQ2 313 aaKnown RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 A0A1W2PQL4 384 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF503-AS2A6NEH8 195 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 TRIM64A6NGJ6 449 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 PRSS44E7EML9 344 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 PPA1Q15181 289 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 C11orf91Q3C1V1 193 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 CCDC36Q8IYA8 594 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ACBD7Q8N6N7 88 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 WDR31Q8NA23 367 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 LINC01560Q8TB33 94 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 HSD17B8Q92506 261 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 BOD1Q96IK1 185 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF224Q9NZL3 707 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 CLEC2DQ9UHP7 191 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 PCDHGB1Q9Y5G3 927 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 KLF2Q9Y5W3 355 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-209ENST00000489485 ICE1Q9Y2F5 2266 aa12.44□□□□□ -0.42
CLDN11-209ENST00000489485 DAPL1A0PJW8 107 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 TMCC2O75069 709 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 UBL3O95164 117 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 CLPTM1O96005 669 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 WNT11O96014 354 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 IGHA1P01876 353 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 MT-ND2P03891 347 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 CST2P09228 141 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 ATP6V1B1P15313 513 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 PPP3CBP16298 524 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 MYL12AP19105 171 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 RAB1AP62820 205 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 KCNMB1Q16558 191 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 GSG1Q2KHT4 349 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 PRSS48Q7RTY5 328 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 CDC20BQ86Y33 519 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 OR2AJ1Q8NGZ0 328 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 OTOSQ8NHW6 89 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 FGFBP3Q8TAT2 258 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
CLDN11-209ENST00000489485 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 CYB5R1Q9UHQ9 305 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 LAMP5Q9UJQ1 280 aa12.43□□□□□ -0.42
CLDN11-209ENST00000489485 COPS3Q9UNS2 423 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms