RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 EPYCQ99645 322 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 MEGF9Q9H1U4 602 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 TUBG2Q9NRH3 451 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 TMEM216Q9P0N5 145 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 CTSZQ9UBR2 303 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4Q9UBX2 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 MARCOQ9UEW3 520 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-233ENST00000489352 SNX12Q9UMY4 172 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 NDUFA2O43678 99 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 SASH3O75995 380 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 CPSF4O95639 269 aaKnown RBP9.36□□□□□ -0.91
HDAC6-233ENST00000489352 LHBP01229 141 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 ADORA3P0DMS8 318 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 G6PDP11413 515 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 PRG2P13727 222 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF32P17041 273 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 VDAC2P45880 294 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-233ENST00000489352 PLTPP55058 493 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 OR8B8Q15620 311 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 C11orf91Q3C1V1 193 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 CEP85LQ5SZL2 805 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 SFRP4Q6FHJ7 346 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-233ENST00000489352 NHLRC1Q6VVB1 395 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF836Q6ZNA1 936 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 SLC35D2Q76EJ3 337 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 KRTCAP2Q8N6L1 136 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 LINC00482Q8N8I6 264 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 BOLLQ8N9W6 283 aaKnown RBP9.36□□□□□ -0.91
HDAC6-233ENST00000489352 OR51D1Q8NGF3 324 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 RORBQ92753 470 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 SLC25A44Q96H78 314 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF583Q96ND8 569 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 MUC13Q9H3R2 512 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 SIAEQ9HAT2 523 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 TRIM36Q9NQ86 728 aa9.36□□□□□ -0.91
HDAC6-233ENST00000489352 HMGN4O00479 90 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 DVL1O14640 695 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 CHST1O43916 411 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SLC22A3O75751 556 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 RPS4Y1P22090 263 aaKnown RBP9.35□□□□□ -0.91
HDAC6-233ENST00000489352 HTR5AP47898 357 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 BMXP51813 675 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 UBE2E1P51965 193 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 ERVK-25P63136 954 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 PSG4Q00888 419 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 CAV1Q03135 178 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 KLRD1Q13241 179 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SGCAQ16586 387 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 INTS11Q5TA45 600 aaKnown RBP9.35□□□□□ -0.91
HDAC6-233ENST00000489352 FRMD7Q6ZUT3 714 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 Q8N2B8 174 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 PNKDQ8N490 385 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 WIPF2Q8TF74 440 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-233ENST00000489352 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 PTP4A1Q93096 173 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 HAVCR1Q96D42 359 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SLC41A3Q96GZ6 507 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 COG8Q96MW5 612 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 NAPGQ99747 312 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-233ENST00000489352 ERP44Q9BS26 406 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 WNT10AQ9GZT5 417 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 MYLK2Q9H1R3 596 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 MEAF6Q9HAF1 191 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SMURF1Q9HCE7 757 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 MRPL39Q9NYK5 338 aaKnown RBP9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SELENONQ9NZV5 590 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 KLHL14Q9P2G3 628 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 SMAD5-AS1Q9Y6J3 95 aa9.35□□□□□ -0.91
HDAC6-233ENST00000489352 F5H5P2 479 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 PLPP3O14495 311 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 AZIN1O14977 448 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 SYNGR1O43759 233 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 ICMTO60725 284 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 PEX11AO75192 247 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 IGHG1P01857 330 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 MRPS25P82663 173 aaKnown RBP9.34□□□□□ -0.91
HDAC6-233ENST00000489352 CNN3Q15417 329 aaKnown RBP9.34□□□□□ -0.91
HDAC6-233ENST00000489352 AANATQ16613 207 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 NCR3LG1Q68D85 454 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 OR4F3Q6IEY1 312 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 CRIP3Q6Q6R5 217 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 PIGWQ7Z7B1 504 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 SERPINA11Q86U17 422 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 MRPL41Q8IXM3 137 aaKnown RBP9.34□□□□□ -0.91
HDAC6-233ENST00000489352 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 MCHR2Q969V1 340 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 PPP3R2Q96LZ3 170 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF582Q96NG8 517 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-233ENST00000489352 C1orf50Q9BV19 199 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 C12orf10Q9HB07 376 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 TNFRSF12AQ9NP84 129 aa9.34□□□□□ -0.91
HDAC6-233ENST00000489352 TRAV38-1A0A0B4J264 116 aa9.33□□□□□ -0.92
HDAC6-233ENST00000489352 RNASET2O00584 256 aaKnown RBP9.33□□□□□ -0.92
HDAC6-233ENST00000489352 RNF13O43567 381 aa9.33□□□□□ -0.92
HDAC6-233ENST00000489352 MYL2P10916 166 aa9.33□□□□□ -0.92
HDAC6-233ENST00000489352 ETFAP13804 333 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms