RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 DOK3Q7L591 496 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 H1FXQ92522 213 aaKnown RBP16.07■□□□□ 0.16
NPHP4-209ENST00000489180 CTSFQ9UBX1 484 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 POM121BA6NF01 834 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 AQP7O14520 342 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 NFYBP25208 207 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 EVX1P49640 407 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 DUSP8Q13202 625 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 TRIM61Q5EBN2 209 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 MANEAQ5SRI9 462 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 KLHDC8BQ8IXV7 354 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 CCL4L1Q8NHW4 92 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 A0A087WZY1 265 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 FAM221AA4D161 298 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 PPP1R2P9O14990 202 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 DEGS1O15121 323 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 CHRM2P08172 466 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 BSGP35613 385 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 FAHD1Q6P587 224 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 C17orf107Q6ZR85 190 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 LINC00299Q6ZSB3 139 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 LANCL2Q9NS86 450 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 PADI1Q9ULC6 663 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 AIPO00170 330 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 EIF4E2O60573 245 aaKnown RBP16.06■□□□□ 0.16
NPHP4-209ENST00000489180 QDPRP09417 244 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 OR8U8P0C7N1 319 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 ECI1P42126 302 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 HSD17B7P56937 341 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 RPL18Q07020 188 aaKnown RBP16.06■□□□□ 0.16
NPHP4-209ENST00000489180 DOC2BQ14184 412 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 HAGHQ16775 308 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 FAM199XQ6PEV8 388 aaPredicted RBP16.06■□□□□ 0.16
NPHP4-209ENST00000489180 OR6K3Q8NGY3 331 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 MITD1Q8WV92 249 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 NUDCD2Q8WVJ2 157 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF355PQ9NSJ1 428 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 ASH2LQ9UBL3 628 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 CHRNA9Q9UGM1 479 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 A0A1W2PNR3 127 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 HLA-HP01893 362 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 DIO1P49895 249 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 CLDN20P56880 219 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 OR52B4Q8NGK2 314 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 TWSG1Q9GZX9 223 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 GPR160Q9UJ42 338 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 SLC22A13Q9Y226 551 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF724A8MTY0 619 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 ICOSLGO75144 302 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 VWA2Q5GFL6 755 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 WDR88Q6ZMY6 472 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 GAREM1Q9H706 876 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 GSTP1P09211 210 aaKnown RBP16.06■□□□□ 0.16
NPHP4-209ENST00000489180 RFX2P48378 723 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 EMP3P54852 163 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 BAMBIQ13145 260 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 EXOSC2Q13868 293 aaKnown RBP16.06■□□□□ 0.16
NPHP4-209ENST00000489180 CDH26Q8IXH8 852 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 OR10J5Q8NHC4 309 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 INTS12Q96CB8 462 aaKnown RBP16.06■□□□□ 0.16
NPHP4-209ENST00000489180 CHST11Q9NPF2 352 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 SLC5A6Q9Y289 635 aa16.06■□□□□ 0.16
NPHP4-209ENST00000489180 CD3DP04234 171 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 NKX2-1P43699 371 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 C2orf76Q3KRA6 126 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 DMRTC1Q5HYR2 192 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 YRDCQ86U90 279 aaKnown RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 VN1R2Q8NFZ6 395 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 OR13C8Q8NGS7 320 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 FAM174AQ8TBP5 190 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 MTCH1Q9NZJ7 389 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 CROCCQ5TZA2 2017 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ARID1BQ8NFD5 2236 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 FAM166BA8MTA8 275 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 SLC25A35Q3KQZ1 300 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 NAA40Q86UY6 237 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF629Q9UEG4 869 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 LINC01553A4QN01 128 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ADRB1P08588 477 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 CD80P33681 288 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 APOBEC1P41238 236 aaKnown RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 FXNQ16595 210 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF468Q5VIY5 522 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ZBTB44Q8NCP5 570 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 OR1J2Q8NGS2 313 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 STT3BQ8TCJ2 826 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 SPACA1Q9HBV2 294 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 NIT2Q9NQR4 276 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 AK3Q9UIJ7 227 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 URB1O60287 2271 aaKnown RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 UPK1AO00322 258 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 DCTN6O00399 190 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 FAM74A1Q5RGS3 127 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 FAM27D1Q5T7N8 215 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 MAML2Q8IZL2 1156 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 NECAP1Q8NC96 275 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 NANPQ8TBE9 248 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ZFPM2Q8WW38 1151 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms