RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PPOXP50336 477 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ACLYP53396 1101 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PKNOX1P55347 436 aa2.53□□□□□ -2
SSR1-209ENST00000488834 BIDP55957 195 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PLP1P60201 277 aa2.53□□□□□ -2
SSR1-209ENST00000488834 MYL6P60660 151 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ATP6V0D1P61421 351 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SELENOTP62341 195 aa2.53□□□□□ -2
SSR1-209ENST00000488834 VSNL1P62760 191 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ITIH4Q14624 930 aa2.53□□□□□ -2
SSR1-209ENST00000488834 NCF4Q15080 339 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ALX1Q15699 326 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SLC25A52Q3SY17 297 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SFT2D3Q587I9 215 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SAMD4BQ5PRF9 694 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 C6orf183Q5T699 404 aa2.53□□□□□ -2
SSR1-209ENST00000488834 GPR157Q5UAW9 335 aa2.53□□□□□ -2
SSR1-209ENST00000488834 DHRS4L2Q6PKH6 230 aa2.53□□□□□ -2
SSR1-209ENST00000488834 TRMT10CQ7L0Y3 403 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 H2BFWTQ7Z2G1 175 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SCD5Q86SK9 330 aa2.53□□□□□ -2
SSR1-209ENST00000488834 AKAP14Q86UN6 197 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ST13P4Q8IZP2 240 aaPredicted RBP2.53□□□□□ -2
SSR1-209ENST00000488834 GABRG1Q8N1C3 465 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ZNF786Q8N393 782 aa2.53□□□□□ -2
SSR1-209ENST00000488834 FTMTQ8N4E7 242 aa2.53□□□□□ -2
SSR1-209ENST00000488834 OR2L3Q8NG85 312 aa2.53□□□□□ -2
SSR1-209ENST00000488834 OR4D9Q8NGE8 314 aa2.53□□□□□ -2
SSR1-209ENST00000488834 OR13C9Q8NGT0 318 aa2.53□□□□□ -2
SSR1-209ENST00000488834 OR56B4Q8NH76 319 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PHOSPHO2Q8TCD6 241 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PYROXD1Q8WU10 500 aa2.53□□□□□ -2
SSR1-209ENST00000488834 RASSF5Q8WWW0 418 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SRSF12Q8WXF0 261 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 DNAJC9Q8WXX5 260 aa2.53□□□□□ -2
SSR1-209ENST00000488834 DGCR14Q96DF8 476 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 ASB9Q96DX5 294 aa2.53□□□□□ -2
SSR1-209ENST00000488834 CEP170P1Q96L14 293 aa2.53□□□□□ -2
SSR1-209ENST00000488834 C12orf42Q96LP6 360 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SLC38A2Q96QD8 506 aa2.53□□□□□ -2
SSR1-209ENST00000488834 C9orf16Q9BUW7 83 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PRRG3Q9BZD7 231 aa2.53□□□□□ -2
SSR1-209ENST00000488834 OR2AG1Q9H205 316 aa2.53□□□□□ -2
SSR1-209ENST00000488834 GAL3ST2Q9H3Q3 398 aa2.53□□□□□ -2
SSR1-209ENST00000488834 NTN4Q9HB63 628 aa2.53□□□□□ -2
SSR1-209ENST00000488834 POPDC2Q9HBU9 364 aa2.53□□□□□ -2
SSR1-209ENST00000488834 MRM3Q9HC36 420 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 PXMP2Q9NR77 195 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PAQR5Q9NXK6 330 aaPredicted RBP2.53□□□□□ -2
SSR1-209ENST00000488834 GIN1Q9NXP7 522 aa2.53□□□□□ -2
SSR1-209ENST00000488834 NUFIP1Q9UHK0 495 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 ERVW-1Q9UQF0 538 aa2.53□□□□□ -2
SSR1-209ENST00000488834 RASD1Q9Y272 281 aa2.53□□□□□ -2
SSR1-209ENST00000488834 AP3M1Q9Y2T2 418 aa2.53□□□□□ -2
SSR1-209ENST00000488834 TIMM10BQ9Y5J6 103 aa2.53□□□□□ -2
SSR1-209ENST00000488834 MYH10P35580 1976 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 FHOD3Q2V2M9 1422 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 MROH7Q68CQ1 1323 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 VPS37CA5D8V6 355 aaPredicted RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 FAM166BA8MTA8 275 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 TAPBPO15533 448 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 GATCO43716 136 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 CXCL13O43927 109 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 UGT1A9O60656 530 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 ICOSLGO75144 302 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CDK14O94921 469 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 PLEKHA8P1O95397 391 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 AP2A1O95782 977 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 GAPDHP04406 335 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 PAEPP09466 180 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 RBMY1CP0DJD4 496 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CCL2P13500 99 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CALCRP30988 508 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 OTX1P32242 354 aaPredicted RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 GTF2H1P32780 548 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 RPL13AP40429 203 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 GNG2P59768 71 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 GNG11P61952 73 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 UBE2IP63279 158 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 TNNC1P63316 161 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 PAX5Q02548 391 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 RCAN2Q14206 197 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 GK3PQ14409 553 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 KCNJ8Q15842 424 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 USF2Q15853 346 aaPredicted RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 MRPL23Q16540 153 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 SLC8B1Q6J4K2 584 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 NIPAL1Q6NVV3 410 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 C19orf35Q6ZS72 473 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 NDUFAF7Q7L592 441 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 COPS6Q7L5N1 327 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 ZNF571Q7Z3V5 609 aaPredicted RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 PEX26Q7Z412 305 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 IFT20Q8IY31 132 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 PQLC3Q8N755 202 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CCNYL1Q8N7R7 359 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 TRPV1Q8NER1 839 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 OR5T3Q8NGG3 340 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 OR1L6Q8NGR2 347 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 TEX47Q8TBZ9 253 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms