RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZNF672Q499Z4 452 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-210ENST00000488228 OGFRL1Q5TC84 451 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-210ENST00000488228 KRT80Q6KB66 452 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 SLC18B1Q6NT16 456 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 PAMR1Q6UXH9 720 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 CFAP77Q6ZQR2 320 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 TCEANCQ8N8B7 351 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 PTP4A1Q93096 173 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 ZMYND19Q96E35 227 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-210ENST00000488228 GRIP2Q9C0E4 1043 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 OR51B6Q9H340 312 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 DCLRE1BQ9H816 532 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 RNPEPL1Q9HAU8 725 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 FBXL3Q9UKT7 428 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 ATP23Q9Y6H3 246 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 LOC100509620A0A075B734 347 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 IQCMA0A1B0GVH7 501 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 E7EQL1 145 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 E9PQ18 207 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 DLGAP1O14490 977 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 PRODHO43272 600 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 SGCEO43556 437 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 TLX2O43763 284 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 GPRIN2O60269 458 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 SELENOFO60613 162 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 GLCEO94923 617 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 PAX7P23759 505 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 STOMP27105 288 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 GSTT1P30711 240 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 FMO3P31513 532 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 NAA10P41227 235 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 ENTPD1P49961 510 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 CDC42P60953 191 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 HGFACQ04756 655 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 PLP2Q04941 152 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 SNTB2Q13425 540 aaKnown RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 RAB35Q15286 201 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 TMEM154Q6P9G4 183 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 VHLLQ6RSH7 139 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 VASH1Q7L8A9 365 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 CDH24Q86UP0 819 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 ERI1Q8IV48 349 aaKnown RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 OR6N2Q8NGY6 317 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 TMEM163Q8TC26 289 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 SLC7A6Q92536 515 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 FBXW5Q969U6 566 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 PITX2Q99697 317 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 CDH20Q9HBT6 801 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 SMPD3Q9NY59 655 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 PLEK2Q9NYT0 353 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 DNAJC27Q9NZQ0 273 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 GDF2Q9UK05 429 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 PLEKHA6Q9Y2H5 1048 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 TIMM10BQ9Y5J6 103 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 USF3Q68DE3 2245 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 CHD3Q12873 2000 aaKnown RBP9.56□□□□□ -0.88
UBE4B-210ENST00000488228 ARID1AO14497 2285 aa9.56□□□□□ -0.88
UBE4B-210ENST00000488228 C5orf49A4QMS7 147 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 OR6C6A6NF89 314 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 SYNGR3O43761 229 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 MRPL3P09001 348 aaKnown RBP9.55□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF35P13682 527 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF823P16415 610 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 CCNOP22674 350 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 APLNRP35414 380 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 WNT5AP41221 380 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 GDI2P50395 445 aaKnown RBP9.55□□□□□ -0.88
UBE4B-210ENST00000488228 HIST1H3AP68431 136 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 SLC34A1Q06495 639 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 TBC1D28Q2M2D7 210 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 CCDC92Q53HC0 331 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-210ENST00000488228 HIST2H3PS2Q5TEC6 136 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 RFPL4BQ6ZWI9 263 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 HIST2H3AQ71DI3 136 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 PACRGLQ8N7B6 248 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 OR10S1Q8NGN2 331 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 OR2AJ1Q8NGZ0 328 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 SMAP2Q8WU79 429 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-210ENST00000488228 NRG4Q8WWG1 115 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 MAP6Q96JE9 813 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 HRASLS5Q96KN8 279 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 INTS14Q96SY0 518 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 C1orf198Q9H425 327 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 IMPAD1Q9NX62 359 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 CISD1Q9NZ45 108 aaKnown RBP9.55□□□□□ -0.88
UBE4B-210ENST00000488228 AASSQ9UDR5 926 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 CYB5R1Q9UHQ9 305 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 KCNG2Q9UJ96 466 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 KLHDC2Q9Y2U9 406 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 RRP15Q9Y3B9 282 aaKnown RBP9.55□□□□□ -0.88
UBE4B-210ENST00000488228 GMPPBQ9Y5P6 360 aa9.55□□□□□ -0.88
UBE4B-210ENST00000488228 ATE1O95260 518 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 SOD3P08294 240 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 DBHP09172 617 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 BLVRAP53004 296 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 ERVS71-1P61550 626 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 NKX6-1P78426 367 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms