RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 CDNFQ49AH0 187 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CCDC157Q569K6 752 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 RNASE10Q5GAN6 216 aaKnown RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 TEX30Q5JUR7 227 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 MTFR2Q6P444 385 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ANKRD16Q6P6B7 361 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 GLDNQ6ZMI3 551 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ESPNLQ6ZVH7 1005 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 COX15Q7KZN9 410 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 DOK3Q7L591 496 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 LRRTM1Q86UE6 522 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PRSS35Q8N3Z0 413 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 TMEM229BQ8NBD8 167 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 OR1M1Q8NGA1 313 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 OR2T35Q8NGX2 323 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 KCNE4Q8WWG9 221 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SNAPC3Q92966 411 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 HGDQ93099 445 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 RNF166Q96A37 237 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 INTS12Q96CB8 462 aaKnown RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 DDOQ99489 341 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ZPBPQ9BS86 351 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PBOV1Q9GZY1 135 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 TMEM185BQ9H7F4 350 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ZNF160Q9HCG1 818 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PCDHB16Q9NRJ7 776 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 MYOTQ9UBF9 498 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 B4GALT7Q9UBV7 327 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SLC22A13Q9Y226 551 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 FARSAQ9Y285 508 aaKnown RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 IGLV3-12A0A075B6K2 115 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 TMEM272A0A1B0GTI8 110 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 KANTRA0A1W2PQU2 76 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 MEN1O00255 615 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 DVL2O14641 736 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CTAG2O75638 210 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 RGS11O94810 467 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 NDUFB6O95139 128 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PMS2P2O95744 297 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 JMJD7P0C870 316 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 FGF5P12034 268 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CTLA4P16410 223 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CD34P28906 385 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 KIR3DL2P43630 455 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PTH2RP49190 550 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CX3CR1P49238 355 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 DSCR4P56555 118 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 RPS11P62280 158 aaKnown RBP eCLIP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SNRPD2P62316 118 aaKnown RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PMPCAQ10713 525 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 MYBPHQ13203 477 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CAMK2DQ13557 499 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SLC36A2Q495M3 483 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 GLYATL3Q5SZD4 288 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ZNF684Q5T5D7 378 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 STEAP1BQ6NZ63 245 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 TRAPPC6BQ86SZ2 158 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 GPR137CQ8N3F9 429 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 FTMTQ8N4E7 242 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SPICQ8N5J4 248 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PLPP7Q8NBV4 271 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 OR14L1PQ8NHC6 308 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ORAI1Q96D31 301 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SCMH1Q96GD3 660 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 MED30Q96HR3 178 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 TMEM41AQ96HV5 264 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CITED4Q96RK1 184 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 GAL3ST1Q99999 423 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SLC25A21Q9BQT8 299 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 PTDSS2Q9BVG9 487 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CST11Q9H112 138 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 OR10A2Q9H208 303 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CDCP1Q9H5V8 836 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 METTL17Q9H7H0 456 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ELL3Q9HB65 397 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 SLC22A11Q9NSA0 550 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ZNF107Q9UII5 783 aaPredicted RBP2.38□□□□□ -2.03
C9orf72-205ENST00000488117 CLDN16Q9Y5I7 305 aa2.38□□□□□ -2.03
C9orf72-205ENST00000488117 ATG2AQ2TAZ0 1938 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 FXYD6-FXYD2A0A087WZ82 144 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 SMLR1H3BR10 107 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 H7C417 338 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 LANCL1O43813 399 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 KDM4BO94953 1096 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 SYNGR4O95473 234 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 GPANK1O95872 356 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 TPOP07202 933 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 ITGA5P08648 1049 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 MSR1P21757 451 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 OTX2P32243 289 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 DCTDP32321 178 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 OR3A3P47888 321 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 OR3A2P47893 321 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 MFGE8Q08431 387 aaPredicted RBP2.37□□□□□ -2.03
C9orf72-205ENST00000488117 ARFRP1Q13795 201 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 CNN3Q15417 329 aaKnown RBP2.37□□□□□ -2.03
C9orf72-205ENST00000488117 PLPPR5Q32ZL2 321 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 TRIM61Q5EBN2 209 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 C6orf183Q5T699 404 aa2.37□□□□□ -2.03
C9orf72-205ENST00000488117 C1QL3Q5VWW1 255 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms