RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PELOQ9BRX2 385 aaKnown RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 ANP32EQ9BTT0 268 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 IL26Q9NPH9 171 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 ASH1LQ9NR48 2969 aaKnown RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 DDX18Q9NVP1 670 aaKnown RBP3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 QPCTLQ9NXS2 382 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 ZFYVE26Q68DK2 2539 aa3.42□□□□□ -1.86
PRPF38A-203ENST00000487160 COL4A2P08572 1712 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CEP295Q9C0D2 2601 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CCDC182A6NF36 153 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 C12orf77C9JDV5 145 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 PSTPIP1O43586 416 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 NPIPB7O75200 414 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CTAG2O75638 210 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CT62P0C5K7 136 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CHTF8P0CG12 524 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 SLC2A5P22732 501 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 HSD17B2P37059 387 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 VHLP40337 213 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 PEX19P40855 299 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 NUP107P57740 925 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 RNASEKQ6P5S7 137 aaKnown RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 BBS5Q8N3I7 341 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 KCNG3Q8TAE7 436 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 DNAJB3Q8WWF6 145 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 ACOT11Q8WXI4 607 aaPredicted RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 FGF14Q92915 247 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 SMARCD2Q92925 531 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 RASD2Q96D21 266 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 FCRL1Q96LA6 429 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 SORT1Q99523 831 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 TMEM246Q9BRR3 403 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 RIOK2Q9BVS4 552 aaKnown RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 ROGDIQ9GZN7 287 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 MFFQ9GZY8 342 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 NCOR1P1Q9H4R4 102 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 ADAP2Q9NPF8 381 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 PXMP2Q9NR77 195 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CLCF1Q9UBD9 225 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 CSDC2Q9Y534 153 aaKnown RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 SPAG17Q6Q759 2223 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 GPR179Q6PRD1 2367 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 KIF26AQ9ULI4 1882 aaPredicted RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 ABCB11O95342 1321 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 NRCAMQ92823 1304 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 BAZ2BQ9UIF8 2168 aaKnown RBP3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
PRPF38A-203ENST00000487160 HEATR9A2RTY3 570 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 A8MU10 97 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 FAM189A1O60320 539 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CACNG3O60359 315 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 TNFSF13O75888 250 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 FGF1P05230 155 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 SERPIND1P05546 499 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 FGF4P08620 206 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 GOLGA8HP0CJ92 632 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 HSPD1P10809 573 aaKnown RBP3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 ICAM2P13598 275 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CMA1P23946 247 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CTRLP40313 264 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 NOVP48745 357 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 ERVK-25P63136 954 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 KCNJ2P63252 427 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 SP4Q02446 784 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 ACVR1Q04771 509 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 PSG7Q13046 419 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 DAZ2Q13117 558 aaKnown RBP3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 SRSF5Q13243 272 aaKnown RBP3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 C1orf185Q5T7R7 199 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CTRB2Q6GPI1 263 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 TRIM40Q6P9F5 258 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 ITPRIPQ8IWB1 547 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 TMEM61Q8N0U2 210 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 SUMF2Q8NBJ7 301 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 OR8B4Q96RC9 309 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 MBOAT4Q96T53 435 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 PLIN2Q99541 437 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 RASL11BQ9BPW5 248 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 NRIP2Q9BQI9 281 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 TMEM59Q9BXS4 323 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CWH43Q9H720 699 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 SIAEQ9HAT2 523 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CRLF2Q9HC73 371 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 DAZ3Q9NR90 486 aaKnown RBP3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 CALYQ9NYX4 217 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 ADAM22Q9P0K1 906 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 IGSF9BQ9UPX0 1349 aa3.4□□□□□ -1.87
PRPF38A-203ENST00000487160 NUP205Q92621 2012 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 SMG1Q96Q15 3661 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 BPTFQ12830 3046 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 TDRD6O60522 2096 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 TENM4Q6N022 2769 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 IGSF10Q6WRI0 2623 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 GJE1A6NN92 205 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 BOLA2-SMG1P6H3BVE0 249 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 M0QZ92 97 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms