RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 MRPL22Q9NWU5 206 aaKnown RBP11.34□□□□□ -0.59
SF1-216ENST00000486867 MTORP42345 2549 aa11.34□□□□□ -0.59
SF1-216ENST00000486867 IGLV3-9A0A075B6K5 115 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 G3V2T6 193 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 H3BSA7 217 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 SGCEO43556 437 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 GPRIN2O60269 458 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 IFNGP01579 166 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ZNF250P15622 560 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 APLNRP35414 380 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 GGT2P36268 569 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 CDKN1AP38936 164 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 WNT5AP41221 380 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 PPOXP50336 477 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 UCP2P55851 309 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ATP5J2P56134 94 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ESRRGP62508 458 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 KRTAP27-1Q3LI81 207 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 CCDC92Q53HC0 331 aaPredicted RBP11.33□□□□□ -0.6
SF1-216ENST00000486867 Q5PR19 223 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 KRT80Q6KB66 452 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ZNF774Q6NX45 483 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 AMIGO2Q86SJ2 522 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ZDHHC13Q8IUH4 622 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 C10orf67Q8IYJ2 551 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ATG16L2Q8NAA4 619 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 WFDC11Q8NEX6 87 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 ZNRF4Q8WWF5 429 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 PYDC1Q8WXC3 89 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
SF1-216ENST00000486867 PERPQ96FX8 193 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 FOXN4Q96NZ1 517 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 RAB3IPQ96QF0 476 aaPredicted RBP11.33□□□□□ -0.6
SF1-216ENST00000486867 BCL2L14Q9BZR8 327 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 FN3KQ9H479 309 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 MARCH7Q9H992 704 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 CDH20Q9HBT6 801 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 PAPOLBQ9NRJ5 636 aaKnown RBP11.33□□□□□ -0.6
SF1-216ENST00000486867 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
SF1-216ENST00000486867 NDRG4Q9ULP0 352 aaKnown RBP11.33□□□□□ -0.6
SF1-216ENST00000486867 CMAHPQ9Y471 501 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
SF1-216ENST00000486867 RIIAD1A6NNX1 92 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 VSTM5A8MXK1 200 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 H3BN98 237 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 SURF4O15260 269 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 GPANK1O95872 356 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 HMGN1P05114 100 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 BMP4P12644 408 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 CCL2P13500 99 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 ZNF3P17036 446 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 SPI1P17947 270 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 CENPAP49450 140 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 GDI2P50395 445 aaKnown RBP11.32□□□□□ -0.6
SF1-216ENST00000486867 CRISP1P54107 249 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 PPP2R2BQ00005 443 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 GALK2Q01415 458 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 TEKQ02763 1124 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 GINS1Q14691 196 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 RAB35Q15286 201 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 MEP1BQ16820 701 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 TEX30Q5JUR7 227 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 SLC18B1Q6NT16 456 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 LURAP1LQ8IV03 231 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 IQCF1Q8N6M8 205 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 GJC3Q8NFK1 279 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 IPCEF1Q8WWN9 437 aaPredicted RBP11.32□□□□□ -0.6
SF1-216ENST00000486867 PTP4A1Q93096 173 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 HDHD2Q9H0R4 259 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 BARX1Q9HBU1 254 aaPredicted RBP11.32□□□□□ -0.6
SF1-216ENST00000486867 ASH2LQ9UBL3 628 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
SF1-216ENST00000486867 J3QW42 95 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 DOK2O60496 412 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 NDUFS7O75251 213 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 ZNF23P17027 643 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 TUBG1P23258 451 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 PYCR1P32322 319 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 RAD52P43351 418 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 BLVRAP53004 296 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 SNRPD2P62316 118 aaKnown RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 EFNB1P98172 346 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 DCLRE1CQ96SD1 692 aaKnown RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 COQ7Q99807 217 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 HCAR1Q9BXC0 346 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 MRPL37Q9BZE1 423 aaKnown RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 RERGLQ9H628 205 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 PNRC2Q9NPJ4 139 aaKnown RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 TUBG2Q9NRH3 451 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 PLEK2Q9NYT0 353 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 GDF2Q9UK05 429 aaPredicted RBP11.31□□□□□ -0.6
SF1-216ENST00000486867 OAZ3Q9UMX2 235 aa11.31□□□□□ -0.6
SF1-216ENST00000486867 COMMD3-BMI1R4GMX3 469 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms