RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SCAMP2O15127 329 aaKnown RBP2.92□□□□□ -1.94
SMC4-218ENST00000486711 SERPINE2P07093 398 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 ASGR1P07306 291 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 GSTM3P21266 225 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 CEACAM3P40198 252 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 MAGEA1P43355 309 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 CSNK1A1P48729 337 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 CRISP1P54107 249 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 ARG2P78540 354 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 LRRC63Q05C16 580 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 IFT88Q13099 833 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 UBE2SQ16763 222 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 UBE2UQ5VVX9 321 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 Q6P435 159 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 CLEC2AQ6UVW9 174 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 OTUD6AQ7L8S5 288 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 C12orf56Q8IXR9 622 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 KATNAL2Q8IYT4 538 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 OR9G4Q8NGQ1 327 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 OR5K2Q8NHB8 316 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 NUBPLQ8TB37 319 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 TMEM230Q96A57 120 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 NTAN1Q96AB6 310 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 TM4SF18Q96CE8 201 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 SEH1LQ96EE3 360 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 TEKT3Q9BXF9 490 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 NEUROG2Q9H2A3 272 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 VCXQ9H320 206 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 SLC40A1Q9NP59 571 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 TMEM9BQ9NQ34 198 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 CTSFQ9UBX1 484 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 KLK12Q9UKR0 248 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 TBC1D24Q9ULP9 559 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 SAR1BQ9Y6B6 198 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 WDR19Q8NEZ3 1342 aa2.92□□□□□ -1.94
SMC4-218ENST00000486711 INSRP06213 1382 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 IGHV5-51A0A0C4DH38 117 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 A0A1B0GW55 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 SUPT3HB4E1H0 165 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 GOLGA8TH3BQL2 631 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 M0R3G1 203 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 MAGEB4O15481 346 aaPredicted RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 RAD51CO43502 376 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 CDC40O60508 579 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMC4-218ENST00000486711 RDH16O75452 317 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 LSM8O95777 96 aaKnown RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 HOXC4P09017 264 aaPredicted RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4L2P0CJ85 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4L3P0CJ86 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4L5P0CJ88 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4L6P0CJ89 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4L7P0CJ90 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 GGT1P19440 569 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 RND2P52198 227 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 RAP1AP62834 184 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 MADCAM1Q13477 382 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 ZNF726P1Q15940 193 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 BEX5Q5H9J7 111 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4L9Q6RFH8 374 aaPredicted RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 ARL9Q6T311 187 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 FAM92BQ6ZTR7 304 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 NCCRP1Q6ZVX7 275 aaPredicted RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 PQLC3Q8N755 202 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 FOPNLQ96NB1 174 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 ZNF285Q96NJ3 590 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 LZTS2Q9BRK4 669 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 UCK2Q9BZX2 261 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 CLSTN2Q9H4D0 955 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 ELOVL6Q9H5J4 265 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 NTN4Q9HB63 628 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 MRPS30Q9NP92 439 aaKnown RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 DUX4Q9UBX2 424 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 TBX21Q9UL17 535 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 PSG8Q9UQ74 426 aa2.91□□□□□ -1.94
SMC4-218ENST00000486711 MN1Q10571 1320 aaPredicted RBP2.91□□□□□ -1.94
SMC4-218ENST00000486711 KCNE1BA0A087WTH5 132 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 A0A1W2PP18 115 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 OR6C74A6NCV1 312 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 NCF1BA6NI72 391 aaPredicted RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 NCF1CA8MVU1 366 aaPredicted RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 TEX46H3BTG2 121 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 CASC3O15234 703 aaKnown RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 MED6O75586 246 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 CTAG2O75638 210 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 OR1E1P30953 314 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 RPS9P46781 194 aaKnown RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 ZNF138P52744 262 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 UBE2NP61088 152 aaKnown RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 WDR43Q15061 677 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMC4-218ENST00000486711 RGNQ15493 299 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 TPTE2P1Q5T6R2 138 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 GPR107Q5VW38 600 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 STUMQ69YW2 141 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 TMCO2Q7Z6W1 182 aaPredicted RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 NOXO1Q8NFA2 376 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 ABHD3Q8WU67 409 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 APH1BQ8WW43 257 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 GALNT14Q96FL9 552 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms