RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PRRT1Q99946 306 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ROPN1BQ9BZX4 212 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 OR10A5Q9H207 317 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ANKRA2Q9H9E1 313 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CXorf21Q9HAI6 301 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 MOV10Q9HCE1 1003 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CTPS2Q9NRF8 586 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 LYARQ9NX58 379 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 TAS2R9Q9NYW1 312 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 TAS2R1Q9NYW7 299 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ADA2Q9NZK5 511 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 KLRF1Q9NZS2 232 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CDC42EP3Q9UKI2 254 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 PROCRQ9UNN8 238 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 DIMT1Q9UNQ2 313 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 LAMP3Q9UQV4 416 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 MRPS18CQ9Y3D5 142 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 FREM1Q5H8C1 2179 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CADP27708 2225 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 TRAV26-1A0A087WT03 109 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 A0A087WWL8 130 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LOC102723971A0A1B0GUV8 181 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 FABP12A6NFH5 140 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SAP18O00422 153 aaKnown RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 TAPBPO15533 448 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 UPK3AO75631 287 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ALDOAP04075 364 aaKnown RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 CLPSP04118 112 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ERCC1P07992 297 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 NR2F6P10588 404 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 DBTP11182 482 aaKnown RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 FCGR2AP12318 317 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 NR2C1P13056 603 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 CD36P16671 472 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF26P17031 533 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 CD22P20273 847 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 CCKARP32238 428 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 GPR12P47775 334 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LHX2P50458 406 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SLURP1P55000 103 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 PKNOX1P55347 436 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 CLDN18P56856 261 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SIRPAP78324 504 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 POU6F2P78424 691 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SLC3A1Q07837 685 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LSAMPQ13449 338 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SELPLGQ14242 412 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 TOMM34Q15785 309 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 KCTD19Q17RG1 926 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LRRC36Q1X8D7 754 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 C5orf47Q569G3 176 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 PLXDC2Q6UX71 529 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LRRN1Q6UXK5 716 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 B3GLCTQ6Y288 498 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 TRABD2AQ86V40 505 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 GPSM1Q86YR5 675 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 GSPT2Q8IYD1 628 aaKnown RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LAS2Q8IYD9 372 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ZBED8Q8IZ13 594 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 PRR22Q8IZ63 422 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 GTPBP8Q8N3Z3 284 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF615Q8N8J6 731 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 PROKR2Q8NFJ6 384 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 OR5M8Q8NGP6 311 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 C22orf15Q8WYQ4 148 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 MAFIPQ8WZ33 124 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SPSB1Q96BD6 273 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ASB9Q96DX5 294 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 MTBPQ96DY7 904 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 CCT8L2Q96SF2 557 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF251Q9BRH9 671 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 SEC22CQ9BRL7 303 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM79Q9BSE2 394 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 MECRQ9BV79 373 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 BEX2Q9BXY8 128 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 HIPK2Q9H2X6 1198 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 POPDC3Q9HBV1 291 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 LPAR2Q9HBW0 351 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 RDH8Q9NYR8 311 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 DKKL1Q9UK85 242 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 ACOT9Q9Y305 439 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 WIF1Q9Y5W5 379 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 URGCP-MRPS24S4R325 110 aa5.98□□□□□ -1.45
HDAC3-209ENST00000486618 YLPM1P49750 1951 aaKnown RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 A0A1B0GVG6 124 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 FAM90A8PA6NJQ4 464 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 FBP2O00757 339 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ACOX3O15254 700 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 OGG1O15527 345 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 NXPH2O95156 264 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 MPIG6BO95866 241 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 CGAP01215 116 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 FAM90A13PP0C7W8 464 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 FAM90A24PP0C7X0 464 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 LINC00614P0C842 121 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 RRASP10301 218 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 MMP9P14780 707 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 GPX3P22352 226 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 OTX1P32242 354 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms