RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 OR6F1Q8NGZ6 308 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 SYNPRQ8TBG9 265 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ASB5Q8WWX0 329 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 PPP1R14AQ96A00 147 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 CREB3L1Q96BA8 519 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 UPRTQ96BW1 309 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 S100A16Q96FQ6 103 aaKnown RBP18.12■□□□□ 0.49
HPS3-206ENST00000486530 C1orf198Q9H425 327 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 CKLFQ9UBR5 152 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 ZNF221Q9UK13 617 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 HHLA2Q9UM44 414 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 FOXJ3Q9UPW0 622 aa18.12■□□□□ 0.49
HPS3-206ENST00000486530 PCSK5Q92824 1860 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 CENPXA8MT69 81 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 TLX3O43711 291 aaPredicted RBP18.11■□□□□ 0.49
HPS3-206ENST00000486530 ORC5O43913 435 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 CD3GP09693 182 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 FSTP19883 344 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 DCTDP32321 178 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 ART1P52961 327 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 CSNK2A1P68400 391 aaPredicted RBP18.11■□□□□ 0.49
HPS3-206ENST00000486530 HAVCR1Q96D42 359 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 SLAMF6Q96DU3 332 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 CENPMQ9NSP4 180 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 FOXJ2Q9P0K8 574 aa18.11■□□□□ 0.49
HPS3-206ENST00000486530 PHF3Q92576 2039 aaKnown RBP18.1■□□□□ 0.49
HPS3-206ENST00000486530 TMEM269A0A1B0GVZ9 245 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 GJE1A6NN92 205 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 SULT1B1O43704 296 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 RAD1O60671 282 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 LRP3O75074 770 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 VAMP5O95183 116 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 UBCP0CG48 685 aaKnown RBP18.1■□□□□ 0.49
HPS3-206ENST00000486530 HLA-DMAP28067 261 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 SRD5A2P31213 254 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 MMP16P51512 607 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 RAC1P63000 192 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 TATDN3Q17R31 274 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 ACER2Q5QJU3 275 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 HES3Q5TGS1 186 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 CARD17Q5XLA6 110 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 B3GNTL1Q67FW5 361 aaPredicted RBP18.1■□□□□ 0.49
HPS3-206ENST00000486530 LRFN4Q6PJG9 635 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 IZUMO1Q8IYV9 350 aa18.1■□□□□ 0.49
HPS3-206ENST00000486530 C7orf50Q9BRJ6 194 aaKnown RBP18.1■□□□□ 0.49
HPS3-206ENST00000486530 NAA11Q9BSU3 229 aaPredicted RBP18.1■□□□□ 0.49
HPS3-206ENST00000486530 LOC107986453A0A1B0GWG9 222 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 C21orf140B9A014 251 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 KLK2P20151 261 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 DDOSTP39656 456 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 MNDAP41218 407 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 CBX3Q13185 183 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 POU4F3Q15319 338 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 PLA1AQ53H76 456 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 BCL2L15Q5TBC7 163 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 TMEM244Q5VVB8 128 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 KLHL24Q6TFL4 600 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 LINGO2Q7L985 606 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 GLRX5Q86SX6 157 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 C15orf40Q8WUR7 153 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 GPR87Q9BY21 358 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 POLR1DQ9Y2S0 133 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 MED12Q93074 2177 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 EIF1AYO14602 144 aaKnown RBP18.09■□□□□ 0.49
HPS3-206ENST00000486530 TPPPO94811 219 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 CSRP1P21291 193 aaKnown RBP18.09■□□□□ 0.49
HPS3-206ENST00000486530 DNASE1L1P49184 302 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 SRP9P49458 86 aaKnown RBP18.09■□□□□ 0.49
HPS3-206ENST00000486530 CLDN17P56750 224 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 MRPS10P82664 201 aaKnown RBP18.09■□□□□ 0.49
HPS3-206ENST00000486530 RNASE12Q5GAN4 147 aaKnown RBP18.09■□□□□ 0.49
HPS3-206ENST00000486530 TMEM69Q5SWH9 247 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 UBASH3BQ8TF42 649 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 SEC61A2Q9H9S3 476 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 PLEKHA1Q9HB21 404 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 CFAP54Q96N23 3096 aa18.09■□□□□ 0.49
HPS3-206ENST00000486530 PCNX2A6NKB5 2137 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 H0YC42 278 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 GABARAPH6UMI1 98 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 IGFBP3P17936 291 aaPredicted RBP18.08■□□□□ 0.49
HPS3-206ENST00000486530 BTCP35070 178 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 EIF1AXP47813 144 aaKnown RBP18.08■□□□□ 0.49
HPS3-206ENST00000486530 KCNMB1Q16558 191 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 STPG1Q5TH74 334 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 ASPHD2Q6ICH7 369 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 PRSS45Q7RTY3 260 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 OR13C3Q8NGS6 347 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 OR2AJ1Q8NGZ0 328 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 SLC7A6Q92536 515 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 FAM206AQ9NX38 181 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 GDF2Q9UK05 429 aaPredicted RBP18.08■□□□□ 0.49
HPS3-206ENST00000486530 LHFPL6Q9Y693 200 aa18.08■□□□□ 0.49
HPS3-206ENST00000486530 OTOGLQ3ZCN5 2332 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 ZNF878C9JN71 531 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 INMT-MINDY4F8WBC2 141 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 SLC17A2O00624 439 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 DNPH1O43598 174 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 QDPRP09417 244 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 DLSTP36957 453 aa18.07■□□□□ 0.48
HPS3-206ENST00000486530 AGFG1P52594 562 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms