RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 PLPP2O43688 288 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 GABRA5P31644 462 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 CAPZA2P47755 286 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 TAS2R43P59537 309 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 LSM6P62312 80 aaKnown RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 FABP5Q01469 135 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 GPR50Q13585 617 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 INSL4Q14641 139 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 CDK5R1Q15078 307 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 SEM1Q6ZVN7 128 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 UBE2J2Q8N2K1 259 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 OR2AJ1Q8NGZ0 328 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 RNF133Q8WVZ7 376 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 SLAMF6Q96DU3 332 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 PGLYRP3Q96LB9 341 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 MYCBPQ99417 103 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 SH3GL3Q99963 347 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 SLX1AQ9BQ83 275 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 MROQ9BYG7 248 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 C1orf198Q9H425 327 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 EXOSC4Q9NPD3 245 aaKnown RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 FBXL3Q9UKT7 428 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 LRP12Q9Y561 859 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 DVL2O14641 736 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 FAPQ12884 760 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 NFATC3Q12968 1075 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 CCDC58Q4VC31 144 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 FAM27BQ5VT28 67 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 NSUN5P2Q63ZY6 315 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 RPL22L1Q6P5R6 122 aaKnown RBP12.68□□□□□ -0.38
COL9A1-207ENST00000486080 C3P1Q6ZMU1 363 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 RPRMLQ8N4K4 120 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 GHSRQ92847 366 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 FBXO17Q96EF6 278 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 FOXB1Q99853 325 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 PDCD1LG2Q9BQ51 273 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 BCL7BQ9BQE9 202 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 HDHD5Q9BXW7 423 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 SLC25A18Q9H1K4 315 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 SIAEQ9HAT2 523 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 GLRX2Q9NS18 164 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 UPB1Q9UBR1 384 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 INTS1Q8N201 2190 aaKnown RBP12.68□□□□□ -0.38
COL9A1-207ENST00000486080 SPTA1P02549 2419 aa12.68□□□□□ -0.38
COL9A1-207ENST00000486080 RTTNQ86VV8 2226 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 OR6C65A6NJZ3 312 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 ZNF587BE7ETH6 402 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 RPL36A-HNRNPH2H7BZ11 118 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 PNPP00491 289 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 OPRL1P41146 370 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 OR3A2P47893 321 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 TGM4P49221 684 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 ARF1P84077 181 aaKnown RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 FOXF2Q12947 444 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 KLHL24Q6TFL4 600 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 FAM214BQ7L5A3 538 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 EGFL6Q8IUX8 553 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 SLC22A24Q8N4F4 322 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 CNEP1R1Q8N9A8 125 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 FAM57AQ8TBR7 257 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 SMIM19Q96E16 107 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 CNTNAP3BQ96NU0 1288 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 CNTNAP3Q9BZ76 1288 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 PNRC2Q9NPJ4 139 aaKnown RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 FRRS1LQ9P0K9 344 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 SLC22A1O15245 554 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 H2BFMP0C1H6 154 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 CD8BP10966 210 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 ABOP16442 354 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 ZNF182P17025 639 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 NPR2P20594 1047 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 KIR2DL2P43627 348 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 RIDAP52758 137 aaKnown RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 MFGE8Q08431 387 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 C22orf42Q6IC83 251 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 CD200R1LQ6Q8B3 271 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 ZNF813Q6ZN06 617 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 TMEM91Q6ZNR0 172 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 PRSS35Q8N3Z0 413 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 RPS4Y2Q8TD47 263 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 TXNL4BQ9NX01 149 aaKnown RBP12.67□□□□□ -0.38
COL9A1-207ENST00000486080 SSR3Q9UNL2 185 aa12.67□□□□□ -0.38
COL9A1-207ENST00000486080 WDR1O75083 606 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 TOXO94900 526 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 GABRA1P14867 456 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 KLRB1Q12918 225 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 ALKBH1Q13686 389 aaKnown RBP12.66□□□□□ -0.38
COL9A1-207ENST00000486080 LY6DQ14210 128 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms