RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SNAPC1Q16533 368 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 KCTD21Q4G0X4 260 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 SYT14P1Q58G82 188 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 RBM48Q5RL73 367 aaKnown RBP8.43□□□□□ -1.06
SND1-213ENST00000486037 FAM69AQ5T7M9 428 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 FBXW9Q5XUX1 488 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 C3orf33Q6P1S2 294 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 VHLLQ6RSH7 139 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 SSX8Q7RTT4 187 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 NANOGNBQ7Z5D8 188 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 C1QL2Q7Z5L3 287 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 ZNF100Q8IYN0 542 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 UBE2J2Q8N2K1 259 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 LNX2Q8N448 690 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 OR52L1Q8NGH7 329 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 MFSD8Q8NHS3 518 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 SGCDQ92629 289 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 ZNF566Q969W8 418 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 SLC25A36Q96CQ1 311 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 DDIT4LQ96D03 193 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 IL4I1Q96RQ9 567 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 IFT27Q9BW83 186 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 RACGAP1Q9H0H5 632 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 CA10Q9NS85 328 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 TREM2Q9NZC2 230 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 KLHL9Q9P2J3 617 aa8.43□□□□□ -1.06
SND1-213ENST00000486037 SPIN1Q9Y657 262 aaPredicted RBP8.43□□□□□ -1.06
SND1-213ENST00000486037 WNK2Q9Y3S1 2297 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 DNAJC9-AS1A6NH13 148 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 LIPT2A6NK58 231 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 B9A039 149 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 BLOC1S5-TXNDC5H3BN57 136 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 M0R082 166 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 OR2T1O43869 369 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 XPNPEP2O43895 674 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 MPZL2O60487 215 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 CYTIPO60759 359 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 HMGN1P05114 100 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 GAAP10253 952 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 CRHBPP24387 322 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 CXCR4P61073 352 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 RPL18Q07020 188 aaKnown RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 TOP3AQ13472 1001 aaPredicted RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 APOFQ13790 326 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 OR7A5Q15622 319 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 ANKDD1AQ495B1 522 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 ALG10Q5BKT4 473 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 ZNF362Q5T0B9 420 aaPredicted RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 SLC35F1Q5T1Q4 408 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 DPY19L2P2Q6ZN68 376 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 Q6ZPA2 131 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 RHOUQ7L0Q8 258 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 BCDIN3DQ7Z5W3 292 aaKnown RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 SLC43A2Q8N370 569 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 BPIFB2Q8N4F0 458 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 SIGLECL1Q8N7X8 197 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 BPIFB6Q8NFQ5 453 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 OR8J1Q8NGP2 316 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 OR5J2Q8NH18 312 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 ZNF417Q8TAU3 575 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 TMEM163Q8TC26 289 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 SLC25A43Q8WUT9 341 aaPredicted RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 TRUB1Q8WWH5 349 aaKnown RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 SLC38A2Q96QD8 506 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 GPX7Q96SL4 187 aaPredicted RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 ZNF587Q96SQ5 575 aaPredicted RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 KATNB1Q9BVA0 655 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 YTHDF1Q9BYJ9 559 aaKnown RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 RAB1BQ9H0U4 201 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 SLITRK2Q9H156 845 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 SEC61A2Q9H9S3 476 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 NRIP3Q9NQ35 241 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 TIGARQ9NQ88 270 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 SLC17A5Q9NRA2 495 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 DDX28Q9NUL7 540 aaKnown RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 PAK1IP1Q9NWT1 392 aaPredicted RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 MRPL39Q9NYK5 338 aaKnown RBP8.42□□□□□ -1.06
SND1-213ENST00000486037 TAS2R5Q9NYW4 299 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 DNAJC27Q9NZQ0 273 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 BAIAP2Q9UQB8 552 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 IER3IP1Q9Y5U9 82 aa8.42□□□□□ -1.06
SND1-213ENST00000486037 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 IGHV1-18A0A0C4DH31 117 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 TMEM129A0AVI4 362 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 ZNF724A8MTY0 619 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 PLPP3O14495 311 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 FAM20BO75063 409 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 ENTPD6O75354 484 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 BCL10O95999 233 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 FSHBP01225 129 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
SND1-213ENST00000486037 HIST1H2ABP04908 130 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 HTR1AP08908 422 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 CCDC159P0C7I6 412 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 RPL4P36578 427 aaKnown RBP8.41□□□□□ -1.06
SND1-213ENST00000486037 CLK1P49759 484 aaKnown RBP8.41□□□□□ -1.06
SND1-213ENST00000486037 OR2B6P58173 313 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 CTXN1P60606 82 aa8.41□□□□□ -1.06
SND1-213ENST00000486037 PRPS1P60891 318 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms