RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 ITFG1Q8TB96 612 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 NUP210Q8TEM1 1887 aaPredicted RBP3.4□□□□□ -1.87
XPA-203ENST00000485042 PYROXD1Q8WU10 500 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 FAM172AQ8WUF8 416 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 ING5Q8WYH8 240 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 BORCS5Q969J3 196 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 IL4I1Q96RQ9 567 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 CLCC1Q96S66 551 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 BCL7BQ9BQE9 202 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 SMYD3Q9H7B4 428 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
XPA-203ENST00000485042 MIEF1Q9NQG6 463 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 HEBP1Q9NRV9 189 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 NUDT15Q9NV35 164 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 ZNF581Q9P0T4 197 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 SPATA7Q9P0W8 599 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 GCNT4Q9P109 453 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 SPRR3Q9UBC9 169 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 WARS2Q9UGM6 360 aaKnown RBP3.4□□□□□ -1.87
XPA-203ENST00000485042 RSL24D1Q9UHA3 163 aaKnown RBP3.4□□□□□ -1.87
XPA-203ENST00000485042 ZNF639Q9UID6 485 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 PHF11Q9UIL8 331 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 RIMS3Q9UJD0 308 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 NDRG2Q9UN36 371 aaKnown RBP3.4□□□□□ -1.87
XPA-203ENST00000485042 PACSIN2Q9UNF0 486 aaPredicted RBP3.4□□□□□ -1.87
XPA-203ENST00000485042 HES2Q9Y543 173 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 PTPRDP23468 1912 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 MYH11P35749 1972 aa3.4□□□□□ -1.87
XPA-203ENST00000485042 FREM2Q5SZK8 3169 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 MYOFQ9NZM1 2061 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 PLXNB3Q9ULL4 1909 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CCDC160A6NGH7 325 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 VSTM2BA6NLU5 285 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 TRDCB7Z8K6 153 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 HSBP1L1C9JCN9 74 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 YKT6O15498 198 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 PSTPIP1O43586 416 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CXCL13O43927 109 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CACNG3O60359 315 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 HCN1O60741 890 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 RAMP3O60896 148 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 ZNF189O75820 626 aaPredicted RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 SERPINA6P08185 405 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 FGF4P08620 206 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 ZNF24P17028 368 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 NMT1P30419 496 aaKnown RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 IL2RGP31785 369 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 UGT1A5P35504 534 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 LEPP41159 167 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 HLCSP50747 726 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CDK9P50750 372 aaKnown RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 DUSP3P51452 185 aaPredicted RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 CD47Q08722 323 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 SLC10A7Q0GE19 358 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 ARHGAP19Q14CB8 494 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 SF3A2Q15428 464 aaKnown RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 ZNF829Q3KNS6 432 aaPredicted RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 C6orf226Q5I0X4 101 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 C1orf185Q5T7R7 199 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 ARMC12Q5T9G4 340 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 PRAMEF20Q5VT98 475 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 THOC7Q6I9Y2 204 aaKnown RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 C4orf22Q6V702 233 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 ARCQ7LC44 396 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 SETD3Q86TU7 594 aaPredicted RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 CDR2LQ86X02 465 aaPredicted RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 ZNF677Q86XU0 584 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CRLF3Q8IUI8 442 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 FAM9CQ8IZT9 166 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CADM2Q8N3J6 435 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 FGFRL1Q8N441 504 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 POM121L12Q8N7R1 296 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 ACMSDQ8TDX5 336 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 FGF13Q92913 245 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 UBE2E3Q969T4 207 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CXorf40BQ96DE9 158 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 MSANTD3Q96H12 275 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CPB2Q96IY4 423 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 APOL2Q9BQE5 337 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 TRIM62Q9BVG3 475 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CHIAQ9BZP6 476 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 SLITRK2Q9H156 845 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 EXO5Q9H790 373 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 GID8Q9NWU2 228 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CLEC5AQ9NY25 188 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 EURLQ9NYK6 297 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 TAS2R1Q9NYW7 299 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 BFARQ9NZS9 450 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 GNPTGQ9UJJ9 305 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 DNAJC12Q9UKB3 198 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 COPS3Q9UNS2 423 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 CACNA1EQ15878 2313 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 TNRC6BQ9UPQ9 1833 aaKnown RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 MYO18AQ92614 2054 aaKnown RBP3.39□□□□□ -1.87
XPA-203ENST00000485042 IGSF10Q6WRI0 2623 aa3.39□□□□□ -1.87
XPA-203ENST00000485042 PTPRBP23467 1997 aa3.38□□□□□ -1.87
XPA-203ENST00000485042 A0A0G2JND7 137 aa3.38□□□□□ -1.87
XPA-203ENST00000485042 SMIM28A0A1B0GU29 152 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms